RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GOLGA6L9A6NEM1 432 aa14.29□□□□□ -0.12
CAPN1-208ENST00000527323 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-208ENST00000527323 HNRNPH2P55795 449 aaKnown RBP14.29□□□□□ -0.12
CAPN1-208ENST00000527323 CTSWP56202 376 aa14.29□□□□□ -0.12
CAPN1-208ENST00000527323 ZNF827Q17R98 1081 aa14.29□□□□□ -0.12
CAPN1-208ENST00000527323 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
CAPN1-208ENST00000527323 DESI2Q9BSY9 194 aa14.29□□□□□ -0.12
CAPN1-208ENST00000527323 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.29□□□□□ -0.12
CAPN1-208ENST00000527323 SAFBQ15424 915 aaKnown RBP eCLIP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 TMEM67Q5HYA8 995 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 TOGARAM2Q6ZUX3 1019 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 TBC1D10CQ8IV04 446 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 MAP3K14Q99558 947 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 MYH15Q9Y2K3 1946 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 UBE2Q2LH0YL09 131 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 SH2B2O14492 632 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 ZNF772Q68DY9 489 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 SPECC1LQ69YQ0 1117 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 GPR161Q8N6U8 529 aaKnown RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 NEK11Q8NG66 645 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 CCDC12Q8WUD4 166 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 INTS13Q9NVM9 706 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 POLR2DO15514 142 aaKnown RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 MYO1BO43795 1136 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 STX10O60499 249 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 BMP6P22004 513 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 EZH2Q15910 746 aaKnown RBP14.28□□□□□ -0.12
CAPN1-208ENST00000527323 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 SMARCE1Q969G3 411 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 INCENPQ9NQS7 918 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 TOMM22Q9NS69 142 aa14.28□□□□□ -0.12
CAPN1-208ENST00000527323 OAS2P29728 719 aaKnown RBP14.27□□□□□ -0.12
CAPN1-208ENST00000527323 MAP3K9P80192 1104 aa14.27□□□□□ -0.12
CAPN1-208ENST00000527323 SMC1AQ14683 1233 aaKnown RBP14.27□□□□□ -0.12
CAPN1-208ENST00000527323 CC2D1AQ6P1N0 951 aaPredicted RBP14.27□□□□□ -0.12
CAPN1-208ENST00000527323 CPLX3Q8WVH0 158 aa14.27□□□□□ -0.12
CAPN1-208ENST00000527323 MAN1B1Q9UKM7 699 aa14.27□□□□□ -0.12
CAPN1-208ENST00000527323 BTAF1O14981 1849 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 BRWD3Q6RI45 1802 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 WNK3Q9BYP7 1800 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 BTBD18B2RXH4 712 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 IFIT3O14879 490 aaKnown RBP14.27□□□□□ -0.13
CAPN1-208ENST00000527323 GPS2Q13227 327 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 POSTNQ15063 836 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 TMEM139Q8IV31 216 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 PARD6BQ9BYG5 372 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 SERTAD1Q9UHV2 236 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 DACH1Q9UI36 760 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 SLC12A7Q9Y666 1083 aa14.27□□□□□ -0.13
CAPN1-208ENST00000527323 WDR19Q8NEZ3 1342 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 RPS6KA4O75676 772 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 IRX5P78411 483 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-208ENST00000527323 GRAMD1CQ8IYS0 662 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 CELF1Q92879 486 aaKnown RBP14.26□□□□□ -0.13
CAPN1-208ENST00000527323 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.26□□□□□ -0.13
CAPN1-208ENST00000527323 ATP8B1O43520 1251 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 SASH3O75995 380 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 NTSR2O95665 410 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 TBC1D8O95759 1140 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■■□□ 16.5
CAPN1-208ENST00000527323 NFIXQ14938 502 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 TC2NQ8N9U0 490 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 ZBTB9Q96C00 473 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 LZTFL1Q9NQ48 299 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 KCNJ14Q9UNX9 436 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 MCAMP43121 646 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 RRP12Q5JTH9 1297 aaKnown RBP14.26□□□□□ -0.13
CAPN1-208ENST00000527323 GOLGA1Q92805 767 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 DHX58Q96C10 678 aa14.26□□□□□ -0.13
CAPN1-208ENST00000527323 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
CAPN1-208ENST00000527323 TJP1Q07157 1748 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 RANBP6O60518 1105 aaKnown RBP14.25□□□□□ -0.13
CAPN1-208ENST00000527323 PRR29P0C7W0 189 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 ADD2P35612 726 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 ST5P78524 1137 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 KLHL10Q6JEL2 608 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 MLKLQ8NB16 471 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 AIDAQ96BJ3 306 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 TMEM87BQ96K49 555 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 IRX2Q9BZI1 471 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-208ENST00000527323 MRFAP1Q9Y605 127 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 ABCC12Q96J65 1359 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 PDE8AO60658 829 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 GRIN1Q05586 938 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 TBX2Q13207 712 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-208ENST00000527323 DIS3L2Q8IYB7 885 aaKnown RBP14.25□□□□□ -0.13
CAPN1-208ENST00000527323 RAI14Q9P0K7 980 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 NUP98P52948 1817 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 LAMB4A4D0S4 1761 aa14.25□□□□□ -0.13
CAPN1-208ENST00000527323 FAM237AA0A1B0GTK4 181 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 MTF1Q14872 753 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms