RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PODXL2Q9NZ53 605 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 CAPN6Q9Y6Q1 641 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 RAC2P15153 192 aa5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 SERPINB4P48594 390 aa5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 PI16Q6UXB8 463 aa5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 TTC6Q86TZ1 520 aa5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 ZNF507Q8TCN5 953 aa5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 RELTQ969Z4 430 aa5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 NECAB3Q96P71 396 aaPredicted RBP5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 AKAP2Q9Y2D5 859 aa5.43□□□□□ -1.54
CLNS1A-209ENST00000527299 FGD1P98174 961 aa5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 ERICH6BQ5W0A0 696 aa5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 DMRTB1Q96MA1 342 aa5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 PCGF6Q9BYE7 350 aa5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 PARD6AQ9NPB6 346 aa5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 NLRP2Q9NX02 1062 aa5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 SLAMF8Q9P0V8 285 aa5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 TPX2Q9ULW0 747 aaKnown RBP5.42□□□□□ -1.54
CLNS1A-209ENST00000527299 DNAJC25-GNG10A0A024R161 153 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 HPXP02790 462 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 CAP2P40123 477 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 ERVFC1P60507 584 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 SLBPQ14493 270 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 RALGPS1Q5JS13 557 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 SCARA3Q6AZY7 606 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 TMC1Q8TDI8 760 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 MYLIPQ8WY64 445 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 UBE2FQ969M7 185 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 PKNOX2Q96KN3 472 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 IRF2BPLQ9H1B7 796 aa5.41□□□□□ -1.54
CLNS1A-209ENST00000527299 ENC1O14682 589 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 RANGAP1P46060 587 aaPredicted RBP5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 MFSD2AQ8NA29 543 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 C3orf58Q8NDZ4 430 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 RIN3Q8TB24 985 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 MIPEPQ99797 713 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 FBRSQ9HAH7 460 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 TMEM59LQ9UK28 342 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 PCDHA4Q9UN74 947 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 SAMM50Q9Y512 469 aa5.4□□□□□ -1.54
CLNS1A-209ENST00000527299 DCAF1Q9Y4B6 1507 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 A0A0G2JLL6 359 aaPredicted RBP5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 FOXD2O60548 495 aaPredicted RBP5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 PAGE1O75459 146 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 ESR1P03372 595 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 LLGL2Q6P1M3 1020 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 NXPE4Q6UWF7 544 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 ELMO3Q96BJ8 720 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 RBCK1Q9BYM8 510 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 ZSWIM5Q9P217 1185 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 CLSPNQ9HAW4 1339 aa5.39□□□□□ -1.55
CLNS1A-209ENST00000527299 ARID3CA6NKF2 412 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 CBX7O95931 251 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 HK2P52789 917 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 INPP5AQ14642 412 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 LRRC14Q15048 493 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 NKG7Q16617 165 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 RASIP1Q5U651 963 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 B4GALNT3Q6L9W6 998 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 ZNF746Q6NUN9 644 aaPredicted RBP5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 LETMD1Q6P1Q0 360 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 TMPRSS7Q7RTY8 843 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 COX4I2Q96KJ9 171 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 SP110Q9HB58 689 aa5.38□□□□□ -1.55
CLNS1A-209ENST00000527299 BMP7P18075 431 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 KIR3DL1P43629 444 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 TNK2Q07912 1038 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 TPTE2Q6XPS3 522 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 BAHD1Q8TBE0 780 aaPredicted RBP5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 KCNC2Q96PR1 638 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 CEP44Q9C0F1 390 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 WNT10AQ9GZT5 417 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 MCOLN1Q9GZU1 580 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 RNF32Q9H0A6 362 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 ADAMTS10Q9H324 1103 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 ZCCHC4Q9H5U6 513 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 CYP8B1Q9UNU6 501 aa5.37□□□□□ -1.55
CLNS1A-209ENST00000527299 PRAMEF27A3QJZ7 478 aa5.36□□□□□ -1.55
CLNS1A-209ENST00000527299 RBAK-RBAKDNI3L0D1 243 aa5.36□□□□□ -1.55
CLNS1A-209ENST00000527299 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
CLNS1A-209ENST00000527299 LRFN4Q6PJG9 635 aa5.36□□□□□ -1.55
CLNS1A-209ENST00000527299 DBX2Q6ZNG2 339 aa5.36□□□□□ -1.55
CLNS1A-209ENST00000527299 CCDC82Q8N4S0 544 aa5.36□□□□□ -1.55
CLNS1A-209ENST00000527299 MYO15BQ96JP2 1530 aa5.36□□□□□ -1.55
CLNS1A-209ENST00000527299 PEX10O60683 326 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 CYP7A1P22680 504 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 DLG4P78352 724 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 IRF2BP1Q8IU81 584 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 HID1Q8IV36 788 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 MARCH10Q8NA82 808 aaPredicted RBP5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 PIWIL2Q8TC59 973 aaKnown RBP5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 ANKRD24Q8TF21 1146 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 PPM1HQ9ULR3 514 aa5.35□□□□□ -1.55
CLNS1A-209ENST00000527299 MYOCOSA0A1B0GUC4 107 aa5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 SEMA7AO75326 666 aa5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 CST3P01034 146 aaPredicted RBP5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 SYN1P17600 705 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms