RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CDAN1Q8IWY9 1227 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 ESR2Q92731 530 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 CSRNP1Q96S65 589 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 PRC1O43663 620 aa22.04■■□□□ 1.12
SMPD1-203ENST00000527275 ST3GAL1Q11201 340 aa22.04■■□□□ 1.12
SMPD1-203ENST00000527275 TNFAIP1Q13829 316 aa22.04■■□□□ 1.12
SMPD1-203ENST00000527275 MCTP1Q6DN14 999 aa22.04■■□□□ 1.12
SMPD1-203ENST00000527275 GGA3Q9NZ52 723 aa22.04■■□□□ 1.12
SMPD1-203ENST00000527275 EHD4Q9H223 541 aa22.04■■□□□ 1.12
SMPD1-203ENST00000527275 COL2A1P02458 1487 aaPredicted RBP22.03■■□□□ 1.12
SMPD1-203ENST00000527275 EPHX2P34913 555 aa22.03■■□□□ 1.12
SMPD1-203ENST00000527275 TNNI2P48788 182 aa22.03■■□□□ 1.12
SMPD1-203ENST00000527275 FGD1P98174 961 aa22.03■■□□□ 1.12
SMPD1-203ENST00000527275 FAM47AQ5JRC9 791 aa22.03■■□□□ 1.12
SMPD1-203ENST00000527275 ZNF287Q9HBT7 754 aa22.03■■□□□ 1.12
SMPD1-203ENST00000527275 WDR33Q9C0J8 1336 aaKnown RBP22.03■■□□□ 1.12
SMPD1-203ENST00000527275 FAM196BA6NMK8 535 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 POTECB2RU33 542 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 SKOR2Q2VWA4 1001 aaPredicted RBP22.02■■□□□ 1.12
SMPD1-203ENST00000527275 CRACR2BQ8N4Y2 399 aaPredicted RBP22.02■■□□□ 1.12
SMPD1-203ENST00000527275 ZKSCAN3Q9BRR0 538 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 DEFB129Q9H1M3 183 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 DNAJC18Q9H819 358 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 GPHNQ9NQX3 736 aaPredicted RBP22.02■■□□□ 1.12
SMPD1-203ENST00000527275 GJB2P29033 226 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 PGAP2Q9UHJ9 254 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 SIPA1L1O43166 1804 aa22.02■■□□□ 1.12
SMPD1-203ENST00000527275 RASA1P20936 1047 aa22.01■■□□□ 1.11
SMPD1-203ENST00000527275 FOXP4Q8IVH2 680 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-203ENST00000527275 ZNF444Q8N0Y2 327 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-203ENST00000527275 IQCA1LA6NCM1 817 aa22.01■■□□□ 1.11
SMPD1-203ENST00000527275 BRF1Q92994 677 aa22.01■■□□□ 1.11
SMPD1-203ENST00000527275 AGXT2Q9BYV1 514 aa22.01■■□□□ 1.11
SMPD1-203ENST00000527275 WDR19Q8NEZ3 1342 aa22.01■■□□□ 1.11
SMPD1-203ENST00000527275 POLR2AP24928 1970 aaKnown RBP22■■□□□ 1.11
SMPD1-203ENST00000527275 TSPY2A6NKD2 308 aa22■■□□□ 1.11
SMPD1-203ENST00000527275 SYT1P21579 422 aa22■■□□□ 1.11
SMPD1-203ENST00000527275 SHMT1P34896 483 aa22■■□□□ 1.11
SMPD1-203ENST00000527275 TFAP4Q01664 338 aa22■■□□□ 1.11
SMPD1-203ENST00000527275 USP50Q70EL3 339 aaPredicted RBP22■■□□□ 1.11
SMPD1-203ENST00000527275 METTL16Q86W50 562 aaKnown RBP22■■□□□ 1.11
SMPD1-203ENST00000527275 APOBEC3FQ8IUX4 373 aaKnown RBP22■■□□□ 1.11
SMPD1-203ENST00000527275 TEPSINQ96N21 525 aa22■■□□□ 1.11
SMPD1-203ENST00000527275 TAF1DQ9H5J8 278 aaPredicted RBP22■■□□□ 1.11
SMPD1-203ENST00000527275 SWAP70Q9UH65 585 aa22■■□□□ 1.11
SMPD1-203ENST00000527275 SCN4AP35499 1836 aa22■■□□□ 1.11
SMPD1-203ENST00000527275 STK3Q13188 491 aa21.99■■□□□ 1.11
SMPD1-203ENST00000527275 IGDCC4Q8TDY8 1250 aa21.99■■□□□ 1.11
SMPD1-203ENST00000527275 STX6O43752 255 aa21.99■■□□□ 1.11
SMPD1-203ENST00000527275 FBXL16Q8N461 479 aa21.99■■□□□ 1.11
SMPD1-203ENST00000527275 UBAC1Q9BSL1 405 aa21.99■■□□□ 1.11
SMPD1-203ENST00000527275 IFIT3O14879 490 aaKnown RBP21.98■■□□□ 1.11
SMPD1-203ENST00000527275 NMT2O60551 498 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 IQCA1Q86XH1 822 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 TMEM87BQ96K49 555 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 TRIM34Q9BYJ4 488 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 GZF1Q9H116 711 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-203ENST00000527275 ANGEL1Q9UNK9 670 aaKnown RBP21.98■■□□□ 1.11
SMPD1-203ENST00000527275 TSPY3P0CV98 308 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 TSPY8P0CW00 308 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 TMEM67Q5HYA8 995 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 MIGA2Q7L4E1 593 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 SENP2Q9HC62 589 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 WDR90Q96KV7 1748 aa21.98■■□□□ 1.11
SMPD1-203ENST00000527275 DTNBO60941 627 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 SART3Q15020 963 aaKnown RBP21.97■■□□□ 1.11
SMPD1-203ENST00000527275 PRAMEF18Q5VWM3 479 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 CHAMP1Q96JM3 812 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 ZSCAN10Q96SZ4 725 aaPredicted RBP21.97■■□□□ 1.11
SMPD1-203ENST00000527275 LMBRD1Q9NUN5 540 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 HERC5Q9UII4 1024 aaKnown RBP21.97■■□□□ 1.11
SMPD1-203ENST00000527275 TNKSO95271 1327 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 PITPNM2Q9BZ72 1349 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 SH2B2O14492 632 aaPredicted RBP21.97■■□□□ 1.11
SMPD1-203ENST00000527275 ZSCAN22P10073 491 aaPredicted RBP21.97■■□□□ 1.11
SMPD1-203ENST00000527275 APOBRQ0VD83 1088 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 EAPPQ56P03 285 aaPredicted RBP21.97■■□□□ 1.11
SMPD1-203ENST00000527275 GTF3C6Q969F1 213 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 IL17RBQ9NRM6 502 aa21.97■■□□□ 1.11
SMPD1-203ENST00000527275 MYH8P13535 1937 aa21.96■■□□□ 1.11
SMPD1-203ENST00000527275 NT5C2P49902 561 aa21.96■■□□□ 1.11
SMPD1-203ENST00000527275 TATDN1Q6P1N9 297 aa21.96■■□□□ 1.11
SMPD1-203ENST00000527275 ENAHQ8N8S7 591 aaPredicted RBP21.96■■□□□ 1.11
SMPD1-203ENST00000527275 DCPSQ96C86 337 aaKnown RBP21.96■■□□□ 1.11
SMPD1-203ENST00000527275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMPD1-203ENST00000527275 LY9Q9HBG7 655 aa21.96■■□□□ 1.11
SMPD1-203ENST00000527275 ERICH2A1L162 156 aa21.95■■□□□ 1.1
SMPD1-203ENST00000527275 AKR1B1P15121 316 aa21.95■■□□□ 1.1
SMPD1-203ENST00000527275 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-203ENST00000527275 MTA3Q9BTC8 594 aa21.95■■□□□ 1.1
SMPD1-203ENST00000527275 PRPF40AO75400 957 aaKnown RBP21.95■■□□□ 1.1
SMPD1-203ENST00000527275 SEC23AQ15436 765 aa21.95■■□□□ 1.1
SMPD1-203ENST00000527275 PNMA8AQ86V59 439 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-203ENST00000527275 ZC3H15Q8WU90 426 aaKnown RBP21.95■■□□□ 1.1
SMPD1-203ENST00000527275 TAOK2Q9UL54 1235 aa21.95■■□□□ 1.1
SMPD1-203ENST00000527275 LIFRP42702 1097 aa21.94■■□□□ 1.1
SMPD1-203ENST00000527275 CERKLQ49MI3 558 aaPredicted RBP21.94■■□□□ 1.1
SMPD1-203ENST00000527275 NEDD1Q8NHV4 660 aa21.94■■□□□ 1.1
SMPD1-203ENST00000527275 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.94■■□□□ 1.1
SMPD1-203ENST00000527275 RRAGCQ9HB90 399 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms