RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 PROCA1Q8NCQ7 364 aaPredicted RBP19.46■□□□□ 0.71
CTSB-213ENST00000527215 SDR42E1Q8WUS8 393 aa19.46■□□□□ 0.71
CTSB-213ENST00000527215 ARMT1Q9H993 441 aa19.46■□□□□ 0.71
CTSB-213ENST00000527215 AGTPBP1Q9UPW5 1226 aa19.46■□□□□ 0.71
CTSB-213ENST00000527215 TNRC18O15417 2968 aaPredicted RBP19.45■□□□□ 0.7
CTSB-213ENST00000527215 MBD4O95243 580 aa19.45■□□□□ 0.7
CTSB-213ENST00000527215 BCRP11274 1271 aa19.45■□□□□ 0.7
CTSB-213ENST00000527215 HMGCS2P54868 508 aa19.45■□□□□ 0.7
CTSB-213ENST00000527215 WDR18Q9BV38 432 aa19.45■□□□□ 0.7
CTSB-213ENST00000527215 ZBTB21Q9ULJ3 1066 aa19.45■□□□□ 0.7
CTSB-213ENST00000527215 POLR3DP05423 398 aaPredicted RBP19.44■□□□□ 0.7
CTSB-213ENST00000527215 CTGFP29279 349 aa19.44■□□□□ 0.7
CTSB-213ENST00000527215 PLCD1P51178 756 aa19.44■□□□□ 0.7
CTSB-213ENST00000527215 UBE3CQ15386 1083 aa19.44■□□□□ 0.7
CTSB-213ENST00000527215 TATDN1Q6P1N9 297 aa19.44■□□□□ 0.7
CTSB-213ENST00000527215 DCP1AQ9NPI6 582 aaPredicted RBP19.44■□□□□ 0.7
CTSB-213ENST00000527215 GINM1Q9NU53 330 aa19.44■□□□□ 0.7
CTSB-213ENST00000527215 MCM9Q9NXL9 1143 aa19.44■□□□□ 0.7
CTSB-213ENST00000527215 DOCK3Q8IZD9 2030 aa19.44■□□□□ 0.7
CTSB-213ENST00000527215 PSMC4P43686 418 aa19.43■□□□□ 0.7
CTSB-213ENST00000527215 EVX2Q03828 476 aa19.43■□□□□ 0.7
CTSB-213ENST00000527215 MTMR2Q13614 643 aa19.43■□□□□ 0.7
CTSB-213ENST00000527215 SH3D19Q5HYK7 790 aa19.43■□□□□ 0.7
CTSB-213ENST00000527215 ZSCAN25Q6NSZ9 544 aa19.43■□□□□ 0.7
CTSB-213ENST00000527215 SMCR8Q8TEV9 937 aaPredicted RBP19.43■□□□□ 0.7
CTSB-213ENST00000527215 PTCH2Q9Y6C5 1203 aa19.43■□□□□ 0.7
CTSB-213ENST00000527215 PRKAB2O43741 272 aa19.42■□□□□ 0.7
CTSB-213ENST00000527215 GNRH1P01148 92 aa19.42■□□□□ 0.7
CTSB-213ENST00000527215 GH2P01242 217 aa19.42■□□□□ 0.7
CTSB-213ENST00000527215 BACE1P56817 501 aa19.42■□□□□ 0.7
CTSB-213ENST00000527215 OTUD7AQ8TE49 926 aaPredicted RBP19.42■□□□□ 0.7
CTSB-213ENST00000527215 ARMC5Q96C12 935 aa19.42■□□□□ 0.7
CTSB-213ENST00000527215 PNMA3Q9UL41 463 aa19.42■□□□□ 0.7
CTSB-213ENST00000527215 SHMT1P34896 483 aa19.41■□□□□ 0.7
CTSB-213ENST00000527215 CERKLQ49MI3 558 aaPredicted RBP19.41■□□□□ 0.7
CTSB-213ENST00000527215 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
CTSB-213ENST00000527215 TRIM47Q96LD4 638 aa19.41■□□□□ 0.7
CTSB-213ENST00000527215 ATP8A2Q9NTI2 1148 aa19.41■□□□□ 0.7
CTSB-213ENST00000527215 TTC41PQ6P2S7 1318 aa19.41■□□□□ 0.7
CTSB-213ENST00000527215 USP17L10C9JJH3 530 aa19.4■□□□□ 0.7
CTSB-213ENST00000527215 FMNL1O95466 1100 aaPredicted RBP19.4■□□□□ 0.7
CTSB-213ENST00000527215 CYP2D6P10635 497 aa19.4■□□□□ 0.7
CTSB-213ENST00000527215 GABPAQ06546 454 aa19.4■□□□□ 0.7
CTSB-213ENST00000527215 PABPC4Q13310 644 aaKnown RBP eCLIP19.4■□□□□ 0.7
CTSB-213ENST00000527215 ABCB5Q2M3G0 1257 aa19.4■□□□□ 0.7
CTSB-213ENST00000527215 NBPF11Q86T75 865 aa19.4■□□□□ 0.7
CTSB-213ENST00000527215 PUS7LQ9H0K6 701 aaKnown RBP19.4■□□□□ 0.7
CTSB-213ENST00000527215 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
CTSB-213ENST00000527215 C19orf81C9J6K1 198 aa19.39■□□□□ 0.69
CTSB-213ENST00000527215 OSBPP22059 807 aa19.39■□□□□ 0.69
CTSB-213ENST00000527215 PRMT2P55345 433 aa19.39■□□□□ 0.69
CTSB-213ENST00000527215 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.69
CTSB-213ENST00000527215 SLC9C1Q4G0N8 1177 aa19.39■□□□□ 0.69
CTSB-213ENST00000527215 PI4K2BQ8TCG2 481 aa19.39■□□□□ 0.69
CTSB-213ENST00000527215 ERC2O15083 957 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 MX1P20591 662 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 FCGRTP55899 365 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 RAB3GAP1Q15042 981 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 ANKRD13CQ8N6S4 541 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 GCC1Q96CN9 775 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 TMEM106CQ9BVX2 250 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 ASCC2Q9H1I8 757 aaPredicted RBP19.38■□□□□ 0.69
CTSB-213ENST00000527215 CABP5Q9NP86 173 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
CTSB-213ENST00000527215 SRRDQ9UH36 339 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 SLC4A4Q9Y6R1 1079 aa19.38■□□□□ 0.69
CTSB-213ENST00000527215 PLXNB2O15031 1838 aa19.37■□□□□ 0.69
CTSB-213ENST00000527215 MYPNQ86TC9 1320 aa19.37■□□□□ 0.69
CTSB-213ENST00000527215 SALL3Q9BXA9 1300 aa19.37■□□□□ 0.69
CTSB-213ENST00000527215 GLRX3O76003 335 aaKnown RBP19.37■□□□□ 0.69
CTSB-213ENST00000527215 HOXD10P28358 340 aa19.37■□□□□ 0.69
CTSB-213ENST00000527215 AAMPQ13685 434 aa19.37■□□□□ 0.69
CTSB-213ENST00000527215 SLC44A5Q8NCS7 719 aa19.37■□□□□ 0.69
CTSB-213ENST00000527215 DYNLL2Q96FJ2 89 aa19.37■□□□□ 0.69
CTSB-213ENST00000527215 KIAA0100Q14667 2235 aaKnown RBP19.36■□□□□ 0.69
CTSB-213ENST00000527215 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 POTEFA5A3E0 1075 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 RNF113AO15541 343 aaKnown RBP19.36■□□□□ 0.69
CTSB-213ENST00000527215 GUCY1A2P33402 732 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 IRX3P78415 501 aaPredicted RBP19.36■□□□□ 0.69
CTSB-213ENST00000527215 ZYXQ15942 572 aaKnown RBP19.36■□□□□ 0.69
CTSB-213ENST00000527215 FAM110CQ1W6H9 321 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 USP17L2Q6R6M4 530 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 SH3TC2Q8TF17 1288 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 APPBP2Q92624 585 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 ZNF333Q96JL9 665 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 FEZ1Q99689 392 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 EMILIN3Q9NT22 766 aa19.36■□□□□ 0.69
CTSB-213ENST00000527215 GREB1LQ9C091 1923 aaPredicted RBP19.35■□□□□ 0.69
CTSB-213ENST00000527215 PARP14Q460N5 1801 aa19.35■□□□□ 0.69
CTSB-213ENST00000527215 USP17L12C9JPN9 530 aa19.35■□□□□ 0.69
CTSB-213ENST00000527215 USP17L21D6R901 530 aa19.35■□□□□ 0.69
CTSB-213ENST00000527215 SMIM22K7EJ46 135 aa19.35■□□□□ 0.69
CTSB-213ENST00000527215 MPHOSPH10O00566 681 aaKnown RBP19.35■□□□□ 0.69
CTSB-213ENST00000527215 ZFYP08048 801 aaPredicted RBP19.35■□□□□ 0.69
CTSB-213ENST00000527215 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
CTSB-213ENST00000527215 GCLCP48506 637 aaPredicted RBP19.35■□□□□ 0.69
CTSB-213ENST00000527215 SEPT2Q15019 361 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms