RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 PTPAQ15257 358 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 FBXL16Q8N461 479 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 FANCLQ9NW38 375 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 PCDHA5Q9Y5H7 936 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 NRAPQ86VF7 1730 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 PDE4BQ07343 736 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 AKNAD1Q5T1N1 836 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 TRAPPC3LQ5T215 181 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 SYT10Q6XYQ8 523 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 FNBP4Q8N3X1 1017 aaPredicted RBP13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 KCNH3Q9ULD8 1083 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 COBLO75128 1261 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 RPS6KA4O75676 772 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 CASP1P29466 404 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 DMTNQ08495 405 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 WTAPQ15007 396 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 TPTE2Q6XPS3 522 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 ZNF384Q8TF68 577 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 NMT2O60551 498 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 UBASH3AP57075 661 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 RTN1Q16799 776 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 E4F1Q66K89 784 aaPredicted RBP13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 LRRN4CLQ8ND94 238 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 COL22A1Q8NFW1 1626 aaPredicted RBP13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 MAP3K14Q99558 947 aa13.75□□□□□ -0.21
CHMP1B-201ENST00000526991 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 CTIFO43310 598 aaKnown RBP13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 CYP2D6P10635 497 aa13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 TPM4P67936 248 aa13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 DIXDC1Q155Q3 683 aa13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 GRIK5Q16478 980 aa13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 TMEM87BQ96K49 555 aa13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 TOB1P50616 345 aaPredicted RBP13.74□□□□□ -0.21
CHMP1B-201ENST00000526991 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 RBM6P78332 1123 aaKnown RBP13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 EP400NLQ6ZTU2 488 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 STAMQ92783 540 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 COL1A1P02452 1464 aaPredicted RBP13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 ANKRD36CQ5JPF3 1778 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 ERICH2A1L162 156 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 ELF2Q15723 593 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 CLEC4GQ6UXB4 293 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 NOSTRINQ8IVI9 506 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 JMYQ8N9B5 988 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 ANKRD7Q92527 254 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 HSD3B7Q9H2F3 369 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 BSDC1Q9NW68 430 aaPredicted RBP13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 SERTAD1Q9UHV2 236 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 PAXBP1Q9Y5B6 917 aa13.73□□□□□ -0.21
CHMP1B-201ENST00000526991 BMP6P22004 513 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 NOM1Q5C9Z4 860 aaKnown RBP13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 KLHL10Q6JEL2 608 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 NACAP1Q9BZK3 213 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 AFMP43652 599 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 TRIM22Q8IYM9 498 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 CNBD1Q8NA66 436 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 PPP1R13BQ96KQ4 1090 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 NYAP1Q6ZVC0 841 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 KRI1Q8N9T8 703 aaKnown RBP13.72□□□□□ -0.21
CHMP1B-201ENST00000526991 USP17L12C9JPN9 530 aa13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 USP17L21D6R901 530 aa13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 F8W031 263 aaPredicted RBP13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 NEMFO60524 1076 aa13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 STX17P56962 302 aa13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 MECOMQ03112 1051 aa13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 RESP18Q5W5W9 173 aa13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 KIF18AQ8NI77 898 aa13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 GNL3LQ9NVN8 582 aaKnown RBP13.71□□□□□ -0.21
CHMP1B-201ENST00000526991 RIMBP2O15034 1052 aa13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 FMNL1O95466 1100 aaPredicted RBP13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 GSDMDP57764 484 aa13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 MYL5Q02045 173 aa13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 SART3Q15020 963 aaKnown RBP13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 EARS2Q5JPH6 523 aaKnown RBP13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 ZNF654Q8IZM8 581 aa13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 HPSEQ9Y251 543 aa13.71□□□□□ -0.22
CHMP1B-201ENST00000526991 MMP1P03956 469 aa13.7□□□□□ -0.22
CHMP1B-201ENST00000526991 FMR1Q06787 632 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHMP1B-201ENST00000526991 PPARAQ07869 468 aa13.7□□□□□ -0.22
CHMP1B-201ENST00000526991 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
CHMP1B-201ENST00000526991 SGMS1Q86VZ5 419 aa13.7□□□□□ -0.22
CHMP1B-201ENST00000526991 DNAI1Q9UI46 699 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms