RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 HOOK1Q9UJC3 728 aaKnown RBP13.36□□□□□ -0.27
LINC01001-201ENST00000526704 LAMB1P07942 1786 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 ACTN4O43707 911 aaKnown RBP13.36□□□□□ -0.27
LINC01001-201ENST00000526704 IGSF3O75054 1194 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 BCAMP50895 628 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 ZNF654Q8IZM8 581 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 CCDC82Q8N4S0 544 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 MIGA1Q8NAN2 632 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 SHISA4Q96DD7 197 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 MYH8P13535 1937 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 VWA3AA6NCI4 1184 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 RCAN1P53805 252 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
LINC01001-201ENST00000526704 MED15Q96RN5 788 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 MTA3Q9BTC8 594 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
LINC01001-201ENST00000526704 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
LINC01001-201ENST00000526704 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 KIF20AO95235 890 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
LINC01001-201ENST00000526704 SMARCE1Q969G3 411 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 PPP2R2CQ9Y2T4 447 aa13.35□□□□□ -0.27
LINC01001-201ENST00000526704 ERICH2A1L162 156 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 PPARAQ07869 468 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 ADGRA1Q86SQ6 560 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 TC2NQ8N9U0 490 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 ENOX1Q8TC92 643 aaKnown RBP13.34□□□□□ -0.27
LINC01001-201ENST00000526704 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 COL1A1P02452 1464 aaPredicted RBP13.34□□□□□ -0.27
LINC01001-201ENST00000526704 CCDC196A0A1B0GTZ2 297 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
LINC01001-201ENST00000526704 SEC23AQ15436 765 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 CSRNP2Q9H175 543 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
LINC01001-201ENST00000526704 FAM205CA6NFA0 338 aa13.33□□□□□ -0.27
LINC01001-201ENST00000526704 ZSCAN12O43309 604 aa13.33□□□□□ -0.27
LINC01001-201ENST00000526704 PDILTQ8N807 584 aa13.33□□□□□ -0.27
LINC01001-201ENST00000526704 SPATA20Q8TB22 786 aa13.33□□□□□ -0.27
LINC01001-201ENST00000526704 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.27
LINC01001-201ENST00000526704 RNF41Q9H4P4 317 aaPredicted RBP13.33□□□□□ -0.27
LINC01001-201ENST00000526704 TNKSO95271 1327 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 ROBO1Q9Y6N7 1651 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 SMIM22K7EJ46 135 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 SLFN14P0C7P3 912 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 PLCD1P51178 756 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 CLCN6P51797 869 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 ARHGAP29Q52LW3 1261 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 SPECC1LQ69YQ0 1117 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 TMTC2Q8N394 836 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 SDR42E1Q8WUS8 393 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 CABP5Q9NP86 173 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 CEP131Q9UPN4 1083 aa13.33□□□□□ -0.28
LINC01001-201ENST00000526704 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
LINC01001-201ENST00000526704 A0A087X0B3 334 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 TADA3O75528 432 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 ATP2B1P20020 1258 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
LINC01001-201ENST00000526704 TOGARAM2Q6ZUX3 1019 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
LINC01001-201ENST00000526704 SAMSN1Q9NSI8 373 aaKnown RBP13.32□□□□□ -0.28
LINC01001-201ENST00000526704 LRP2BPQ9P2M1 347 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 CCDC152Q4G0S7 254 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
LINC01001-201ENST00000526704 RAI14Q9P0K7 980 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 ANAPC4Q9UJX5 808 aa13.32□□□□□ -0.28
LINC01001-201ENST00000526704 STX10O60499 249 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 CDK11BP21127 795 aaKnown RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 CYP7A1P22680 504 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 ADKP55263 362 aaKnown RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 CHRNDQ07001 517 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 PKN1Q16512 942 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 EARS2Q5JPH6 523 aaKnown RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 SRRTQ9BXP5 876 aaKnown RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 IQSEC3Q9UPP2 1182 aaPredicted RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 FHOD1Q9Y613 1164 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 COL5A3P25940 1745 aaPredicted RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
LINC01001-201ENST00000526704 MINDY4BA8MYZ0 360 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 NTSR2O95665 410 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 FUT2Q10981 343 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 WDR24Q96S15 920 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 ST7Q9NRC1 585 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 VPS54Q9P1Q0 977 aa13.31□□□□□ -0.28
LINC01001-201ENST00000526704 A0A1B0GTH6 734 aa13.3□□□□□ -0.28
LINC01001-201ENST00000526704 ERCC5P28715 1186 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms