RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 ADGRE1Q14246 886 aa16.98■□□□□ 0.31
SSRP1-203ENST00000526696 PUM3Q15397 648 aaKnown RBP16.98■□□□□ 0.31
SSRP1-203ENST00000526696 RABL6Q3YEC7 729 aaPredicted RBP16.98■□□□□ 0.31
SSRP1-203ENST00000526696 AKNAD1Q5T1N1 836 aa16.98■□□□□ 0.31
SSRP1-203ENST00000526696 ANKRD44Q8N8A2 993 aa16.98■□□□□ 0.31
SSRP1-203ENST00000526696 BICC1Q9H694 974 aaKnown RBP16.98■□□□□ 0.31
SSRP1-203ENST00000526696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
SSRP1-203ENST00000526696 IGHA2P01877 340 aa16.97■□□□□ 0.31
SSRP1-203ENST00000526696 CAP2P40123 477 aa16.97■□□□□ 0.31
SSRP1-203ENST00000526696 MTMR2Q13614 643 aa16.97■□□□□ 0.31
SSRP1-203ENST00000526696 TIFAQ96CG3 184 aa16.97■□□□□ 0.31
SSRP1-203ENST00000526696 PRDM12Q9H4Q4 367 aa16.97■□□□□ 0.31
SSRP1-203ENST00000526696 EPHX3Q9H6B9 360 aa16.97■□□□□ 0.31
SSRP1-203ENST00000526696 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
SSRP1-203ENST00000526696 UTYO14607 1347 aa16.96■□□□□ 0.31
SSRP1-203ENST00000526696 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
SSRP1-203ENST00000526696 USP17L5A8MUK1 530 aa16.96■□□□□ 0.31
SSRP1-203ENST00000526696 CNGA1P29973 690 aa16.96■□□□□ 0.31
SSRP1-203ENST00000526696 CCDC85BQ15834 202 aaPredicted RBP16.96■□□□□ 0.31
SSRP1-203ENST00000526696 MFSD14CQ5VZR4 134 aa16.96■□□□□ 0.31
SSRP1-203ENST00000526696 EDC3Q96F86 508 aaKnown RBP16.96■□□□□ 0.31
SSRP1-203ENST00000526696 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-203ENST00000526696 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-203ENST00000526696 MSCO60682 206 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 VAMP4O75379 141 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 BMP1P13497 986 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 CYP2C19P33261 490 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 BACE1P56817 501 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 JAG1P78504 1218 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 GAS2L1Q99501 681 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-203ENST00000526696 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 HCN4Q9Y3Q4 1203 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
SSRP1-203ENST00000526696 SIPA1L1O43166 1804 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 CNMDO75829 334 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 CYBAP13498 195 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 PBX2P40425 430 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 RHBDL3P58872 404 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 TLE2Q04725 743 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 ANO1Q5XXA6 986 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 ALYREFQ86V81 257 aaKnown RBP16.94■□□□□ 0.3
SSRP1-203ENST00000526696 NPLOC4Q8TAT6 608 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
SSRP1-203ENST00000526696 SLC5A1P13866 664 aa16.93■□□□□ 0.3
SSRP1-203ENST00000526696 ADCYAP1R1P41586 468 aa16.93■□□□□ 0.3
SSRP1-203ENST00000526696 BTDP43251 543 aa16.93■□□□□ 0.3
SSRP1-203ENST00000526696 SHROOM1Q2M3G4 852 aaPredicted RBP16.93■□□□□ 0.3
SSRP1-203ENST00000526696 C1orf53Q5VUE5 145 aa16.93■□□□□ 0.3
SSRP1-203ENST00000526696 LPIN2Q92539 896 aa16.93■□□□□ 0.3
SSRP1-203ENST00000526696 FERMT2Q96AC1 680 aa16.93■□□□□ 0.3
SSRP1-203ENST00000526696 SNX27Q96L92 541 aa16.93■□□□□ 0.3
SSRP1-203ENST00000526696 GRXCR1A8MXD5 290 aa16.92■□□□□ 0.3
SSRP1-203ENST00000526696 HOXC6P09630 235 aa16.92■□□□□ 0.3
SSRP1-203ENST00000526696 CCAR1Q8IX12 1150 aaKnown RBP16.92■□□□□ 0.3
SSRP1-203ENST00000526696 ARRDC4Q8NCT1 418 aa16.92■□□□□ 0.3
SSRP1-203ENST00000526696 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
SSRP1-203ENST00000526696 PBX4Q9BYU1 374 aa16.92■□□□□ 0.3
SSRP1-203ENST00000526696 PRRC2BQ5JSZ5 2229 aaKnown RBP16.92■□□□□ 0.3
SSRP1-203ENST00000526696 KBTBD13C9JR72 458 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 PTPREP23469 700 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 PHKA1P46020 1223 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 ATP2B2Q01814 1243 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 TFF2Q03403 129 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 ZNF384Q8TF68 577 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 SRCIN1Q9C0H9 1055 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 AS3MTQ9HBK9 375 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 C11orf16Q9NQ32 467 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 TMOD4Q9NZQ9 345 aa16.91■□□□□ 0.3
SSRP1-203ENST00000526696 KIAA0355O15063 1070 aa16.9■□□□□ 0.3
SSRP1-203ENST00000526696 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
SSRP1-203ENST00000526696 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
SSRP1-203ENST00000526696 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
SSRP1-203ENST00000526696 CXXC1Q9P0U4 656 aaPredicted RBP16.9■□□□□ 0.3
SSRP1-203ENST00000526696 TACC3Q9Y6A5 838 aa16.9■□□□□ 0.3
SSRP1-203ENST00000526696 FANCIQ9NVI1 1328 aa16.9■□□□□ 0.3
SSRP1-203ENST00000526696 BRWD1Q9NSI6 2320 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 SLC15A5A6NIM6 579 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
SSRP1-203ENST00000526696 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
SSRP1-203ENST00000526696 CLTBP09497 229 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 RFX5P48382 616 aaPredicted RBP16.89■□□□□ 0.29
SSRP1-203ENST00000526696 KCNQ1P51787 676 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 FPGSQ05932 587 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 GRB14Q14449 540 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 LRRC41Q15345 812 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 ATG9AQ7Z3C6 839 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.89■□□□□ 0.299e-8■■■■■ 37.1
SSRP1-203ENST00000526696 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 MROH7-TTC4A0A0A0MT08 1334 aa16.89■□□□□ 0.29
SSRP1-203ENST00000526696 GBF1Q92538 1859 aa16.88■□□□□ 0.29
SSRP1-203ENST00000526696 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
SSRP1-203ENST00000526696 EYA2O00167 538 aa16.88■□□□□ 0.29
SSRP1-203ENST00000526696 KHSRPQ92945 711 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSRP1-203ENST00000526696 DENND2AQ9ULE3 1009 aa16.88■□□□□ 0.29
SSRP1-203ENST00000526696 C19orf81C9J6K1 198 aa16.87■□□□□ 0.29
SSRP1-203ENST00000526696 RAG1P15918 1043 aa16.87■□□□□ 0.29
SSRP1-203ENST00000526696 IGFBP4P22692 258 aa16.87■□□□□ 0.29
SSRP1-203ENST00000526696 TMEM31Q5JXX7 168 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms