RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 ZNF157P51786 506 aaPredicted RBP7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 NEK4P51957 841 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 PDE4BQ07343 736 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 TNFAIP1Q13829 316 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 CHST3Q7LGC8 479 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 RALYLQ86SE5 291 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 FAM83AQ86UY5 434 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 APOBEC3FQ8IUX4 373 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 SLC44A5Q8NCS7 719 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 NCOA7Q8NI08 942 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 STAG1Q8WVM7 1258 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 CDCA5Q96FF9 252 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 TCEANC2Q96MN5 208 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 UPF3BQ9BZI7 483 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 TM6SF1Q9BZW5 370 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 KRT23Q9C075 422 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 DHX36Q9H2U1 1008 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 MKNK2Q9HBH9 465 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 GGA3Q9NZ52 723 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 SERPINB13Q9UIV8 391 aa7.52□□□□□ -1.21
ATPAF1-207ENST00000525633 COL2A1P02458 1487 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 GREB1LQ9C091 1923 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 CCDC85CA6NKD9 419 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 FAM196BA6NMK8 535 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 ORC4O43929 436 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 KDM4AO75164 1064 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 HMGB1P09429 215 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 RPS6KB1P23443 525 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 ANP32AP39687 249 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 FGD1P98174 961 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 COL9A3Q14050 684 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 FAM47AQ5JRC9 791 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 PRAMEF18Q5VWM3 479 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 C16orf86Q6ZW13 317 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 NOL8Q76FK4 1167 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 RUFY3Q7L099 469 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 CYB5R4Q7L1T6 521 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 MIGA2Q7L4E1 593 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 DHX32Q7L7V1 743 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 FOXP4Q8IVH2 680 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 CDAN1Q8IWY9 1227 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 MB21D2Q8IYB1 491 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 ZNF444Q8N0Y2 327 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 NKX2-3Q8TAU0 364 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 IL17RAQ96F46 866 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 CSRNP1Q96S65 589 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 LRRC2Q9BYS8 371 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 MCOLN1Q9GZU1 580 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 DEFB129Q9H1M3 183 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 CNNM2Q9H8M5 875 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 ZSWIM6Q9HCJ5 1215 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 PDRG1Q9NUG6 133 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 PI4KBQ9UBF8 816 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 BAZ2BQ9UIF8 2168 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 DOCK1Q14185 1865 aa7.51□□□□□ -1.21
ATPAF1-207ENST00000525633 ATRNL1Q5VV63 1379 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 ROBO3Q96MS0 1386 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 OTOFQ9HC10 1997 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 PRC1O43663 620 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 ST18O60284 1047 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 SLC10A3P09131 477 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 FGRP09769 529 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 PCP11498 1178 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 MCM5P33992 734 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 SHMT1P34896 483 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 RGS19P49795 217 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 ANTXR2P58335 489 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 FKBP1BP68106 108 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 TFAP4Q01664 338 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 EXOSC10Q01780 885 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 NBPF12Q5TAG4 269 aaPredicted RBP7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 Q6ZUG5 572 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 ESR2Q92731 530 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 TEPSINQ96N21 525 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 ZKSCAN3Q9BRR0 538 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 LARP6Q9BRS8 491 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 EHD4Q9H223 541 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 ZNF287Q9HBT7 754 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 RNF186Q9NXI6 227 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 SAGE1Q9NXZ1 904 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 ZSWIM5Q9P217 1185 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 PITPNM2Q9BZ72 1349 aa7.5□□□□□ -1.21
ATPAF1-207ENST00000525633 TSPY2A6NKD2 308 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 UBE2Q2LH0YL09 131 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 MPHOSPH10O00566 681 aaKnown RBP7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 IFIT3O14879 490 aaKnown RBP7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 TRPA1O75762 1119 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 TSPY3P0CV98 308 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 TSPY8P0CW00 308 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 AKR1B1P15121 316 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 RASA1P20936 1047 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 AK2P54819 239 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 GABPAQ06546 454 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 DGKZQ13574 1117 aa7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 CERKLQ49MI3 558 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-207ENST00000525633 TMEM67Q5HYA8 995 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms