RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 TM6SF1Q9BZW5 370 aa16.73■□□□□ 0.27
LTBP3-204ENST00000525443 KIF5CO60282 957 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 STX10O60499 249 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 DDX58O95786 925 aaKnown RBP16.72■□□□□ 0.27
LTBP3-204ENST00000525443 EVA1CP58658 441 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 WDR93Q6P2C0 686 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 FMR1NBQ8N0W7 255 aaPredicted RBP16.72■□□□□ 0.27
LTBP3-204ENST00000525443 DCAF5Q96JK2 942 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 YIPF3Q9GZM5 350 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 RTEL1Q9NZ71 1219 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 ZEB2O60315 1214 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 FAM163BP0C2L3 166 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 NDUFA8P51970 172 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 SLC8A3P57103 927 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 TC2NQ8N9U0 490 aa16.72■□□□□ 0.27
LTBP3-204ENST00000525443 RSRC1Q96IZ7 334 aaKnown RBP16.72■□□□□ 0.27
LTBP3-204ENST00000525443 DDX21Q9NR30 783 aaKnown RBP eCLIP16.72■□□□□ 0.27
LTBP3-204ENST00000525443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.27
LTBP3-204ENST00000525443 ATXN2Q99700 1313 aaKnown RBP16.72■□□□□ 0.27
LTBP3-204ENST00000525443 SOWAHDA6NJG2 315 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 IFT88Q13099 833 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 KIAA1328Q86T90 577 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 SLC35F6Q8N357 371 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 DRAXINQ8NBI3 349 aaPredicted RBP16.71■□□□□ 0.27
LTBP3-204ENST00000525443 SSH3Q8TE77 659 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 CCDC114Q96M63 670 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 MEGF6O75095 1541 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 CTAGE9A4FU28 777 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 NLRP12P59046 1061 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
LTBP3-204ENST00000525443 CCDC175P0C221 793 aa16.71■□□□□ 0.26
LTBP3-204ENST00000525443 ZKSCAN1P17029 563 aaPredicted RBP16.71■□□□□ 0.26
LTBP3-204ENST00000525443 PDCD2Q16342 344 aaPredicted RBP16.71■□□□□ 0.26
LTBP3-204ENST00000525443 TTLL7Q6ZT98 887 aa16.71■□□□□ 0.26
LTBP3-204ENST00000525443 MAB21L3Q8N8X9 362 aa16.71■□□□□ 0.26
LTBP3-204ENST00000525443 CDC5LQ99459 802 aaKnown RBP16.71■□□□□ 0.26
LTBP3-204ENST00000525443 MYO6Q9UM54 1294 aa16.71■□□□□ 0.26
LTBP3-204ENST00000525443 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 ECEL1O95672 775 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
LTBP3-204ENST00000525443 OR8K1Q8NGG5 319 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 PI4K2BQ8TCG2 481 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 TBC1D31Q96DN5 1066 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.7■□□□□ 0.26
LTBP3-204ENST00000525443 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
LTBP3-204ENST00000525443 SLC3A2P08195 630 aaKnown RBP16.7■□□□□ 0.26
LTBP3-204ENST00000525443 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 CCDC148Q8NFR7 591 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 PICK1Q9NRD5 415 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 HAUS2Q9NVX0 235 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
LTBP3-204ENST00000525443 OPLAHO14841 1288 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 ATP1A2P50993 1020 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 USP4Q13107 963 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 COPS6Q7L5N1 327 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 FUKQ8N0W3 1084 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 MRPS27Q92552 414 aaKnown RBP16.69■□□□□ 0.26
LTBP3-204ENST00000525443 SH3GL2Q99962 352 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 MYO1BO43795 1136 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 PPFIA3O75145 1194 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 TUBBP07437 444 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 ABL1P00519 1130 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 PRPHP41219 470 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 CREB3L3Q68CJ9 461 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 MICALCLQ6ZW33 695 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 TAF6LQ9Y6J9 622 aa16.69■□□□□ 0.26
LTBP3-204ENST00000525443 KDM6AO15550 1401 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-204ENST00000525443 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
LTBP3-204ENST00000525443 TUBB4BP68371 445 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 MTA1Q13330 715 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
LTBP3-204ENST00000525443 ZCRB1Q8TBF4 217 aaKnown RBP16.68■□□□□ 0.26
LTBP3-204ENST00000525443 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 PCDHA7Q9UN72 937 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 RBM8AQ9Y5S9 174 aaKnown RBP16.68■□□□□ 0.26
LTBP3-204ENST00000525443 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
LTBP3-204ENST00000525443 ALS2Q96Q42 1657 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 NEXNQ0ZGT2 675 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 NAA35Q5VZE5 725 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 SMARCC2Q8TAQ2 1214 aa16.68■□□□□ 0.26
LTBP3-204ENST00000525443 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 NSMCE1Q8WV22 266 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 RIPOR2Q9Y4F9 1068 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 PDIA6Q15084 440 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 BLOC1S2Q6QNY1 142 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 BZW1Q7L1Q6 419 aaKnown RBP16.67■□□□□ 0.26
LTBP3-204ENST00000525443 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 SOS2Q07890 1332 aaPredicted RBP16.67■□□□□ 0.26
LTBP3-204ENST00000525443 IKBKBO14920 756 aa16.67■□□□□ 0.26
LTBP3-204ENST00000525443 MYO1EQ12965 1108 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms