RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 TAOK2Q9UL54 1235 aa21.09■□□□□ 0.97
NR1H3-228ENST00000525441 AGTPBP1Q9UPW5 1226 aa21.09■□□□□ 0.97
NR1H3-228ENST00000525441 HPS5Q9UPZ3 1129 aa21.09■□□□□ 0.97
NR1H3-228ENST00000525441 MYH7P12883 1935 aa21.09■□□□□ 0.97
NR1H3-228ENST00000525441 ATAD5Q96QE3 1844 aa21.08■□□□□ 0.97
NR1H3-228ENST00000525441 RNF113AO15541 343 aaKnown RBP21.08■□□□□ 0.97
NR1H3-228ENST00000525441 PLCD1P51178 756 aa21.08■□□□□ 0.97
NR1H3-228ENST00000525441 PABPC4Q13310 644 aaKnown RBP eCLIP21.08■□□□□ 0.97
NR1H3-228ENST00000525441 CERKLQ49MI3 558 aaPredicted RBP21.08■□□□□ 0.97
NR1H3-228ENST00000525441 NAV1Q8NEY1 1877 aa21.08■□□□□ 0.97
NR1H3-228ENST00000525441 PI4K2BQ8TCG2 481 aa21.08■□□□□ 0.97
NR1H3-228ENST00000525441 CPA4Q9UI42 421 aa21.08■□□□□ 0.97
NR1H3-228ENST00000525441 PNMA3Q9UL41 463 aa21.08■□□□□ 0.97
NR1H3-228ENST00000525441 SLC4A4Q9Y6R1 1079 aa21.08■□□□□ 0.97
NR1H3-228ENST00000525441 ADGRA2Q96PE1 1338 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 PRKAB2O43741 272 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 GH2P01242 217 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 CHGBP05060 677 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 HMGCS2P54868 508 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 LACTBP83111 547 aaPredicted RBP21.07■□□□□ 0.96
NR1H3-228ENST00000525441 SH3D19Q5HYK7 790 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 APPBP2Q92624 585 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 PUS7LQ9H0K6 701 aaKnown RBP21.07■□□□□ 0.96
NR1H3-228ENST00000525441 CABP5Q9NP86 173 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 TMOD4Q9NZQ9 345 aa21.07■□□□□ 0.96
NR1H3-228ENST00000525441 PTPRFP10586 1907 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 C19orf81C9J6K1 198 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 CYP2C8P10632 490 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 BACE1P56817 501 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 JAG1P78504 1218 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 GABPAQ06546 454 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 ABCB5Q2M3G0 1257 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 SMCR8Q8TEV9 937 aaPredicted RBP21.06■□□□□ 0.96
NR1H3-228ENST00000525441 SWAP70Q9UH65 585 aa21.06■□□□□ 0.96
NR1H3-228ENST00000525441 DDX60LQ5H9U9 1706 aaKnown RBP21.06■□□□□ 0.96
NR1H3-228ENST00000525441 SALL3Q9BXA9 1300 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 USP17L10C9JJH3 530 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 GNRH1P01148 92 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 SHMT1P34896 483 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 MTMR2Q13614 643 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 SMC5Q8IY18 1101 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 FSD1Q9BTV5 496 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 STAP2Q9UGK3 403 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 PTPN22Q9Y2R2 807 aa21.05■□□□□ 0.96
NR1H3-228ENST00000525441 OSBPP22059 807 aa21.04■□□□□ 0.96
NR1H3-228ENST00000525441 SHROOM1Q2M3G4 852 aaPredicted RBP21.04■□□□□ 0.96
NR1H3-228ENST00000525441 TREML2Q5T2D2 321 aa21.04■□□□□ 0.96
NR1H3-228ENST00000525441 STRBPQ96SI9 672 aaKnown RBP21.04■□□□□ 0.96
NR1H3-228ENST00000525441 CYP2D6P10635 497 aa21.03■□□□□ 0.96
NR1H3-228ENST00000525441 BCRP11274 1271 aa21.03■□□□□ 0.96
NR1H3-228ENST00000525441 GNAT2P19087 354 aa21.03■□□□□ 0.96
NR1H3-228ENST00000525441 PDE1AP54750 535 aa21.03■□□□□ 0.96
NR1H3-228ENST00000525441 RAB3GAP1Q15042 981 aa21.03■□□□□ 0.96
NR1H3-228ENST00000525441 OSBP2Q969R2 916 aa21.03■□□□□ 0.96
NR1H3-228ENST00000525441 FEZ1Q99689 392 aa21.03■□□□□ 0.96
NR1H3-228ENST00000525441 USP17L12C9JPN9 530 aa21.02■□□□□ 0.96
NR1H3-228ENST00000525441 USP17L21D6R901 530 aa21.02■□□□□ 0.96
NR1H3-228ENST00000525441 PRMT2P55345 433 aa21.02■□□□□ 0.96
NR1H3-228ENST00000525441 C12orf60Q5U649 245 aa21.02■□□□□ 0.96
NR1H3-228ENST00000525441 GIMAP6Q6P9H5 292 aa21.02■□□□□ 0.96
NR1H3-228ENST00000525441 USP17L2Q6R6M4 530 aa21.02■□□□□ 0.96
NR1H3-228ENST00000525441 LNPKQ9C0E8 428 aa21.02■□□□□ 0.96
NR1H3-228ENST00000525441 ARPP21Q9UBL0 812 aaPredicted RBP21.02■□□□□ 0.96
NR1H3-228ENST00000525441 LOC285556D6RIA3 1793 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 MPHOSPH10O00566 681 aaKnown RBP21.01■□□□□ 0.95
NR1H3-228ENST00000525441 GPAA1O43292 621 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 IGHDP01880 384 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 HOXD10P28358 340 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 PSMC4P43686 418 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 GCLCP48506 637 aaPredicted RBP21.01■□□□□ 0.95
NR1H3-228ENST00000525441 CAP1Q01518 475 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 B4GALNT3Q6L9W6 998 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 EVI5LQ96CN4 794 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 ARHGAP39Q9C0H5 1083 aa21.01■□□□□ 0.95
NR1H3-228ENST00000525441 FMNL1O95466 1100 aaPredicted RBP21■□□□□ 0.95
NR1H3-228ENST00000525441 USP14P54578 494 aa21■□□□□ 0.95
NR1H3-228ENST00000525441 FCGRTP55899 365 aa21■□□□□ 0.95
NR1H3-228ENST00000525441 IRX3P78415 501 aaPredicted RBP21■□□□□ 0.95
NR1H3-228ENST00000525441 EVX2Q03828 476 aa21■□□□□ 0.95
NR1H3-228ENST00000525441 CTR9Q6PD62 1173 aa21■□□□□ 0.95
NR1H3-228ENST00000525441 CHD1LQ86WJ1 897 aa21■□□□□ 0.95
NR1H3-228ENST00000525441 DYNLL2Q96FJ2 89 aa21■□□□□ 0.95
NR1H3-228ENST00000525441 ASCC2Q9H1I8 757 aaPredicted RBP21■□□□□ 0.95
NR1H3-228ENST00000525441 HOXA7P31268 230 aaPredicted RBP20.99■□□□□ 0.95
NR1H3-228ENST00000525441 NUCB1Q02818 461 aa20.99■□□□□ 0.95
NR1H3-228ENST00000525441 TMEM179Q6ZVK1 233 aa20.99■□□□□ 0.95
NR1H3-228ENST00000525441 SLC44A5Q8NCS7 719 aa20.99■□□□□ 0.95
NR1H3-228ENST00000525441 CCDC17Q96LX7 622 aa20.99■□□□□ 0.95
NR1H3-228ENST00000525441 BAZ2AQ9UIF9 1905 aaKnown RBP20.98■□□□□ 0.95
NR1H3-228ENST00000525441 CYP2D7A0A087X1C5 515 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 GSG1L2A8MUP6 293 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 M0R2C6 588 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 APPP05067 770 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 CDK8P49336 464 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 SEPT2Q15019 361 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 FAM110CQ1W6H9 321 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 SBK1Q52WX2 424 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 ZMYM1Q5SVZ6 1142 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 C16orf86Q6ZW13 317 aa20.98■□□□□ 0.95
NR1H3-228ENST00000525441 TRIM47Q96LD4 638 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms