RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TMA7Q9Y2S6 64 aaKnown RBP7.03□□□□□ -1.28
USP47-206ENST00000525367 A0A1W2PQH9 124 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 FAM221BA6H8Z2 402 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 SPDYE3A6NKU9 549 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 EIF5BO60841 1220 aaKnown RBP7.02□□□□□ -1.29
USP47-206ENST00000525367 IMPDH2P12268 514 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 PDE4BQ07343 736 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 TMEM201Q5SNT2 666 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 FDX2Q6P4F2 183 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 TTC6Q86TZ1 520 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 CD163Q86VB7 1156 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 C12orf50Q8NA57 414 aaPredicted RBP7.02□□□□□ -1.29
USP47-206ENST00000525367 RNF214Q8ND24 703 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 ISL2Q96A47 359 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 SUGCTQ9HAC7 445 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 CYP4F12Q9HCS2 524 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 GMIPQ9P107 970 aa7.02□□□□□ -1.29
USP47-206ENST00000525367 NME1P15531 152 aaKnown RBP7.01□□□□□ -1.29
USP47-206ENST00000525367 GUCY2CP25092 1073 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 RASA3Q14644 834 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 TNNI3KQ59H18 835 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 NLRC3Q7RTR2 1065 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 FAM13CQ8NE31 585 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 OR6P1Q8NGX9 317 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 DCAF11Q8TEB1 546 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 SLC9A7Q96T83 725 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 SNTG2Q9NY99 539 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 NOP53Q9NZM5 478 aaKnown RBP7.01□□□□□ -1.29
USP47-206ENST00000525367 USP21Q9UK80 565 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 PCDHB10Q9UN67 800 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 LTBP3Q9NS15 1303 aa7.01□□□□□ -1.29
USP47-206ENST00000525367 FANCGO15287 622 aa7□□□□□ -1.29
USP47-206ENST00000525367 RNGTTO60942 597 aaKnown RBP7□□□□□ -1.29
USP47-206ENST00000525367 SPATA31C1P0DKV0 1188 aa7□□□□□ -1.29
USP47-206ENST00000525367 GLB1P16278 677 aa7□□□□□ -1.29
USP47-206ENST00000525367 RAB6AP20340 208 aa7□□□□□ -1.29
USP47-206ENST00000525367 NOS3P29474 1203 aa7□□□□□ -1.29
USP47-206ENST00000525367 ASPAP45381 313 aa7□□□□□ -1.29
USP47-206ENST00000525367 IREB2P48200 963 aaKnown RBP7□□□□□ -1.29
USP47-206ENST00000525367 SLBPQ14493 270 aaKnown RBP eCLIP7□□□□□ -1.29
USP47-206ENST00000525367 DDR2Q16832 855 aa7□□□□□ -1.29
USP47-206ENST00000525367 SOGA3Q5TF21 947 aa7□□□□□ -1.29
USP47-206ENST00000525367 NBPF6Q5VWK0 638 aa7□□□□□ -1.29
USP47-206ENST00000525367 JAZF1Q86VZ6 243 aa7□□□□□ -1.29
USP47-206ENST00000525367 XAGE3Q8WTP9 111 aa7□□□□□ -1.29
USP47-206ENST00000525367 NBPF4Q96M43 638 aa7□□□□□ -1.29
USP47-206ENST00000525367 UBL7Q96S82 380 aaPredicted RBP7□□□□□ -1.29
USP47-206ENST00000525367 ATXN3LQ9H3M9 355 aa7□□□□□ -1.29
USP47-206ENST00000525367 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
USP47-206ENST00000525367 CNNM2Q9H8M5 875 aa7□□□□□ -1.29
USP47-206ENST00000525367 AKTIPQ9H8T0 292 aa7□□□□□ -1.29
USP47-206ENST00000525367 LGR6Q9HBX8 967 aa7□□□□□ -1.29
USP47-206ENST00000525367 ADAM30Q9UKF2 790 aa7□□□□□ -1.29
USP47-206ENST00000525367 MAPK8IP1Q9UQF2 711 aa7□□□□□ -1.29
USP47-206ENST00000525367 R3HCC1Q9Y3T6 440 aaKnown RBP7□□□□□ -1.29
USP47-206ENST00000525367 TACC3Q9Y6A5 838 aa7□□□□□ -1.29
USP47-206ENST00000525367 GJB6O95452 261 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 CASP7P55210 303 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 HNRNPUQ00839 825 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP47-206ENST00000525367 PRAMEF13Q5VWM6 474 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 MRM1Q6IN84 353 aaKnown RBP6.99□□□□□ -1.29
USP47-206ENST00000525367 CDPF1Q6NVV7 123 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 C6orf15Q6UXA7 325 aaPredicted RBP6.99□□□□□ -1.29
USP47-206ENST00000525367 UNC5AQ6ZN44 842 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 SRPK1Q96SB4 655 aaKnown RBP6.99□□□□□ -1.29
USP47-206ENST00000525367 TM9SF2Q99805 663 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 SIRPGQ9P1W8 387 aa6.99□□□□□ -1.29
USP47-206ENST00000525367 PIK3R2O00459 728 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 CHRNA4P43681 627 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 LRRFIP1Q32MZ4 808 aaKnown RBP6.98□□□□□ -1.29
USP47-206ENST00000525367 SGO2Q562F6 1265 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 CDCP2Q5VXM1 449 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 ANKRD34AQ69YU3 496 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 Q6ZS46 218 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 HID1Q8IV36 788 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 MCATQ8IVS2 390 aaKnown RBP6.98□□□□□ -1.29
USP47-206ENST00000525367 TMEM130Q8N3G9 435 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 WFDC12Q8WWY7 111 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 LENG1Q96BZ8 264 aaPredicted RBP6.98□□□□□ -1.29
USP47-206ENST00000525367 DEPDC7Q96QD5 511 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 KIF2CQ99661 725 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 POLR3GLQ9BT43 218 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 SEMA6BQ9H3T3 888 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 PIDD1Q9HB75 910 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 FAM86C1Q9NVL1 165 aa6.98□□□□□ -1.29
USP47-206ENST00000525367 TNFRSF10CO14798 259 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 U2SURPO15042 1029 aaKnown RBP6.97□□□□□ -1.29
USP47-206ENST00000525367 DYNC1LI2O43237 492 aaPredicted RBP6.97□□□□□ -1.29
USP47-206ENST00000525367 RAG1P15918 1043 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 MBTPS1Q14703 1052 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 ZNF746Q6NUN9 644 aaPredicted RBP6.97□□□□□ -1.29
USP47-206ENST00000525367 MRPL41Q8IXM3 137 aaKnown RBP6.97□□□□□ -1.29
USP47-206ENST00000525367 SMYD4Q8IYR2 804 aaPredicted RBP6.97□□□□□ -1.29
USP47-206ENST00000525367 PHACTR4Q8IZ21 702 aa6.97□□□□□ -1.29
USP47-206ENST00000525367 NLGN1Q8N2Q7 840 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms