RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ZNFX1Q9P2E3 1918 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 RPTORQ8N122 1335 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 BAG3O95817 575 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 ASNSP08243 561 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 CYP2B6P20813 491 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 JAG1P78504 1218 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 SHROOM1Q2M3G4 852 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 TTC39AQ5SRH9 613 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 ADGRA1Q86SQ6 560 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 MAPKAPK5Q8IW41 473 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 TGFBRAP1Q8WUH2 860 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 TRIB2Q92519 343 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 DNAJC18Q9H819 358 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 FLT1P17948 1338 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 A0A0C4DFX4 3053 aa11.74□□□□□ -0.53
TRAPPC4-206ENST00000525303 IPO8O15397 1037 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 GDF11O95390 407 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 PLCG2P16885 1265 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 LAMA2P24043 3122 aaKnown RBP11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 HOXA7P31268 230 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 HERVK_113P62684 666 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 ATF7IPQ6VMQ6 1270 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 CRACR2BQ8N4Y2 399 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 CLUAP1Q96AJ1 413 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 PALD1Q9ULE6 856 aa11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 ZMYND8Q9ULU4 1186 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC4-206ENST00000525303 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 USP17L10C9JJH3 530 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 BCAR3O75815 825 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 CYP2E1P05181 493 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 PPP4CP60510 307 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 TNNI3KQ59H18 835 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 FOXP4Q8IVH2 680 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 GPRC5AQ8NFJ5 357 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 GDF15Q99988 308 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 GPR108Q9NPR9 543 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 SAP30BPQ9UHR5 308 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 OGDHLQ9ULD0 1010 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 FPGT-TNNI3KV9GXZ4 949 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 BAZ2AQ9UIF9 1905 aaKnown RBP11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 PARP14Q460N5 1801 aa11.72□□□□□ -0.53
TRAPPC4-206ENST00000525303 MYH7P12883 1935 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 RLFQ13129 1914 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 SYN1P17600 705 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 BMP8BP34820 402 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 POLA2Q14181 598 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 Q3C1V9 767 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 MAP3K21Q5TCX8 1036 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 METTL16Q86W50 562 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 SLC17A8Q8NDX2 589 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 SOCS4Q8WXH5 440 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 PAGR1Q9BTK6 254 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 GINM1Q9NU53 330 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 RBPJLQ9UBG7 517 aa11.71□□□□□ -0.53
TRAPPC4-206ENST00000525303 COL11A1P12107 1806 aaPredicted RBP11.71□□□□□ -0.54
TRAPPC4-206ENST00000525303 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.54
TRAPPC4-206ENST00000525303 CUL9Q8IWT3 2517 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 PFASO15067 1338 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 XRCC5P13010 732 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 ZKSCAN1P17029 563 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 MAPK4P31152 587 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 MAGEA10P43363 369 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 ZAP70P43403 619 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 ERVK-24P63145 666 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 GPR142Q7Z601 462 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 CCAR1Q8IX12 1150 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 TMEM57Q8N5G2 664 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 PORCNQ9H237 461 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 EMILIN3Q9NT22 766 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 RCAN3Q9UKA8 241 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 LTBP2Q14767 1821 aa11.7□□□□□ -0.54
TRAPPC4-206ENST00000525303 SURF6O75683 361 aaKnown RBP11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 GH2P01242 217 aa11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 CCND3P30281 292 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 RGS2P41220 211 aa11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 CACNB2Q08289 660 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 CCL14Q16627 93 aa11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
TRAPPC4-206ENST00000525303 TRMT44Q8IYL2 757 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms