RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ZNF280CQ8ND82 737 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 GLIS2Q9BZE0 524 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-209ENST00000525132 CFDP1Q9UEE9 299 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-209ENST00000525132 ATXN7L1Q9ULK2 861 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-209ENST00000525132 ZNF541Q9H0D2 1346 aa4.9□□□□□ -1.63
CSDE1-209ENST00000525132 COL5A2P05997 1499 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-209ENST00000525132 C2CD2LO14523 706 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 GDF11O95390 407 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 ATP2B4P23634 1241 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 CCR10P46092 362 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 GRIN2CQ14957 1233 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 COX20Q5RI15 118 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 RIPOR1Q6ZS17 1223 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 C7orf61Q8IZ16 206 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 Q8N3U1 123 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 ZKSCAN4Q969J2 545 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-209ENST00000525132 SUSD3Q96L08 255 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 HINFPQ9BQA5 517 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 LSM14BQ9BX40 385 aaKnown RBP4.89□□□□□ -1.63
CSDE1-209ENST00000525132 SAP130Q9H0E3 1048 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 RBM19Q9Y4C8 960 aaKnown RBP4.89□□□□□ -1.63
CSDE1-209ENST00000525132 PCDHGC4Q9Y5F7 938 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 LY75O60449 1722 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 NAIPQ13075 1403 aa4.89□□□□□ -1.63
CSDE1-209ENST00000525132 DMXL1Q9Y485 3027 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 CDC14CA4D256 554 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 PRR23AA6NEV1 266 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 TGFBR3LH3BV60 316 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 IGHA1P01876 353 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 MAPTP10636 758 aaKnown RBP4.88□□□□□ -1.63
CSDE1-209ENST00000525132 SCNN1AP37088 669 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 SRSF11Q05519 484 aaKnown RBP4.88□□□□□ -1.63
CSDE1-209ENST00000525132 LAMC2Q13753 1193 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 PUM1Q14671 1186 aaKnown RBP eCLIP4.88□□□□□ -1.634e-8■□□□□ 9.2
CSDE1-209ENST00000525132 EFHC2Q5JST6 749 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 FIGNL1Q6PIW4 674 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 HFE2Q6ZVN8 426 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 HSH2DQ96JZ2 352 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 MBIPQ9NS73 344 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 ZNF232Q9UNY5 417 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 ALS2Q96Q42 1657 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 KAT6BQ8WYB5 2073 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 CCDC141Q6ZP82 1450 aa4.88□□□□□ -1.63
CSDE1-209ENST00000525132 ADGRB1O14514 1584 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 TEX15Q9BXT5 2789 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 NPR3P17342 541 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 INPP5BP32019 993 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 DLK2Q6UY11 383 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 RHPN1Q8TCX5 695 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 ATOH1Q92858 354 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-209ENST00000525132 SYTL4Q96C24 671 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-209ENST00000525132 ABHD17AQ96GS6 310 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 KLF15Q9UIH9 416 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 COL1A1P02452 1464 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-209ENST00000525132 CFAP46Q8IYW2 2715 aa4.87□□□□□ -1.63
CSDE1-209ENST00000525132 LMO7Q8WWI1 1683 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 TOGARAM1Q9Y4F4 1720 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 FBN2P35556 2912 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ATXN7O15265 892 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ADAM23O75077 832 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 PTCD1O75127 700 aaKnown RBP4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ARHGEF15O94989 841 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ADRB1P08588 477 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 CSB-PGBD3P0DP91 1061 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 FGFR3P22607 806 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 CTBSQ01459 385 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 CAP1Q01518 475 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ECM1Q16610 540 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ZNF385CQ66K41 422 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-209ENST00000525132 LRRC69Q6ZNQ3 347 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 BTLAQ7Z6A9 289 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ETFBKMTQ8IXQ9 262 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ADSSL1Q8N142 457 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 PGBD3Q8N328 593 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 ZNF513Q8N8E2 541 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-209ENST00000525132 SH3TC2Q8TF17 1288 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 WHAMMQ8TF30 809 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 SEPT3Q9UH03 358 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 FRYQ5TBA9 3013 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 MYO9AB2RTY4 2548 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 DMDP11532 3685 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 TRPM3Q9HCF6 1732 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-209ENST00000525132 PLXNA3P51805 1871 aa4.86□□□□□ -1.63
CSDE1-209ENST00000525132 PIEZO2Q9H5I5 2752 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 PROB1E7EW31 1015 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 OPLAHO14841 1288 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 FARP2O94887 1054 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-209ENST00000525132 HOXB4P17483 251 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-209ENST00000525132 EPS15P42566 896 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 DMWDQ09019 674 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 ARSJQ5FYB0 599 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-209ENST00000525132 NUTM2GQ5VZR2 741 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 C16orf46Q6P387 395 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 C1orf229Q6ZS94 237 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-209ENST00000525132 TMC4Q7Z404 712 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 CD99L2Q8TCZ2 262 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 ACDQ96AP0 544 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 MFSD14AQ96MC6 490 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 EFCC1Q9HA90 598 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 AVENQ9NQS1 362 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms