RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 NFXL1Q6ZNB6 911 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 SH3BP5LQ7L8J4 393 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 NBPF11Q86T75 865 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-205ENST00000524775 PRMT6Q96LA8 375 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-205ENST00000524775 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.75□□□□□ -0.21
CSTF3-205ENST00000524775 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
CSTF3-205ENST00000524775 COL2A1P02458 1487 aaPredicted RBP13.74□□□□□ -0.21
CSTF3-205ENST00000524775 IFNAR1P17181 557 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 PICALMQ13492 652 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 MICU3Q86XE3 530 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 IQCA1Q86XH1 822 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 FANCBQ8NB91 859 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 MTMR14Q8NCE2 650 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 ORC3Q9UBD5 711 aaPredicted RBP13.74□□□□□ -0.21
CSTF3-205ENST00000524775 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
CSTF3-205ENST00000524775 BCS1LQ9Y276 419 aa13.74□□□□□ -0.21
CSTF3-205ENST00000524775 PLIN4Q96Q06 1357 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 STK36Q9NRP7 1315 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 IGKV6D-41A0A0C4DH26 115 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 ERICH2A1L162 156 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 VPS37CA5D8V6 355 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-205ENST00000524775 PPFIA3O75145 1194 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 CACNB3P54284 484 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 RTN1Q16799 776 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 IFIT1BQ5T764 474 aaKnown RBP13.73□□□□□ -0.21
CSTF3-205ENST00000524775 TTC6Q86TZ1 520 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 METTL16Q86W50 562 aaKnown RBP13.73□□□□□ -0.21
CSTF3-205ENST00000524775 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 AGBL3Q8NEM8 1001 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 TDRD3Q9H7E2 651 aaKnown RBP13.73□□□□□ -0.21
CSTF3-205ENST00000524775 MKNK2Q9HBH9 465 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
CSTF3-205ENST00000524775 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-205ENST00000524775 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
CSTF3-205ENST00000524775 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 TSPY2A6NKD2 308 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 UBE2Q2LH0YL09 131 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 TRAK2O60296 914 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 DDAH1O94760 285 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 FMNL1O95466 1100 aaPredicted RBP13.72□□□□□ -0.21
CSTF3-205ENST00000524775 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 SHMT1P34896 483 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 RASSF7Q02833 373 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 ZNF444Q8N0Y2 327 aaPredicted RBP13.72□□□□□ -0.21
CSTF3-205ENST00000524775 CRACR2BQ8N4Y2 399 aaPredicted RBP13.72□□□□□ -0.21
CSTF3-205ENST00000524775 FAM184AQ8NB25 1140 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 TMEM87AQ8NBN3 555 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 EHD4Q9H223 541 aa13.72□□□□□ -0.21
CSTF3-205ENST00000524775 ATRNL1Q5VV63 1379 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 DDTLA6NHG4 134 aaPredicted RBP13.71□□□□□ -0.21
CSTF3-205ENST00000524775 FZD9O00144 591 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 ENTPD3O75355 529 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 SLURP2P0DP57 97 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 CCDC178Q5BJE1 867 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 CIAPIN1Q6FI81 312 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 FBXO18Q8NFZ0 1043 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 PHKBQ93100 1093 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 AIFM3Q96NN9 605 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 MAP3K14Q99558 947 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 CNPY2Q9Y2B0 182 aa13.71□□□□□ -0.21
CSTF3-205ENST00000524775 GOLGB1Q14789 3259 aaKnown RBP13.71□□□□□ -0.22
CSTF3-205ENST00000524775 CPLX1O14810 134 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 PRPF40AO75400 957 aaKnown RBP13.7□□□□□ -0.22
CSTF3-205ENST00000524775 CDKL5O76039 1030 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 CALM1P0DP23 149 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 CALM2P0DP24 149 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 CALM3P0DP25 149 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 PTMSP20962 102 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 RBM5P52756 815 aaKnown RBP eCLIP13.7□□□□□ -0.22
CSTF3-205ENST00000524775 ZNF280AP59817 542 aaPredicted RBP13.7□□□□□ -0.22
CSTF3-205ENST00000524775 DNM1Q05193 864 aaKnown RBP13.7□□□□□ -0.22
CSTF3-205ENST00000524775 OTUD7BQ6GQQ9 843 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 FAM173BQ6P4H8 233 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 CATIPQ7Z7H3 387 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 FERMT3Q86UX7 667 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 ZNF70Q9UC06 446 aaPredicted RBP13.7□□□□□ -0.22
CSTF3-205ENST00000524775 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 PGAP2Q9UHJ9 254 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 CNTNAP1P78357 1384 aa13.7□□□□□ -0.22
CSTF3-205ENST00000524775 SHTN1A0MZ66 631 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 PLEKHA8P1O95397 391 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms