RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 TBX2Q13207 712 aaPredicted RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 ELF2Q15723 593 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 CCDC152Q4G0S7 254 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 HOMER1Q86YM7 354 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 SMARCE1Q969G3 411 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 FANCLQ9NW38 375 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 MAN1B1Q9UKM7 699 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 SLC4A4Q9Y6R1 1079 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 STX10O60499 249 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 TPM1P09493 284 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 PCP11498 1178 aaKnown RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 ZNF18P17022 549 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 ERCC5P28715 1186 aaPredicted RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 MORC3Q14149 939 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 ISM2Q6H9L7 571 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 FANCBQ8NB91 859 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 SPATA20Q8TB22 786 aa9.51□□□□□ -0.89
CHD7-202ENST00000524602 UTP14AQ9BVJ6 771 aaKnown RBP9.51□□□□□ -0.89
CHD7-202ENST00000524602 H2AFXP16104 143 aaPredicted RBP9.5□□□□□ -0.89
CHD7-202ENST00000524602 IGHMBP2P38935 993 aaKnown RBP9.5□□□□□ -0.89
CHD7-202ENST00000524602 EIF5P55010 431 aaKnown RBP9.5□□□□□ -0.89
CHD7-202ENST00000524602 FBXO38Q6PIJ6 1188 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 DPF2Q92785 391 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 SPECC1LQ69YQ0 1117 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 CERS3Q8IU89 383 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 ZNF654Q8IZM8 581 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 LCORLQ8N3X6 602 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 ESR2Q92731 530 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 UBAC1Q9BSL1 405 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 DNAI1Q9UI46 699 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 TACC3Q9Y6A5 838 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 BCL9LQ86UU0 1499 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 BMP6P22004 513 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 PPARAQ07869 468 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 TRIM65Q6PJ69 517 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 BARGINQ6ZT62 677 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 CREBRFQ8IUR6 639 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 REXO1L1PQ8IX06 675 aa9.5□□□□□ -0.89
CHD7-202ENST00000524602 HELBQ8NG08 1087 aaPredicted RBP9.5□□□□□ -0.89
CHD7-202ENST00000524602 CDC5LQ99459 802 aaKnown RBP9.5□□□□□ -0.89
CHD7-202ENST00000524602 AATFQ9NY61 560 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD7-202ENST00000524602 MYH14Q7Z406 1995 aaKnown RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 A0A1B0GUL6 1792 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 UBAP1LF5GYI3 381 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 POLR2DO15514 142 aaKnown RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 GUCY1A2P33402 732 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 PLCD1P51178 756 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 SUSD4Q5VX71 490 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 TMED8Q6PL24 325 aaPredicted RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 ZNF771Q7L3S4 317 aaPredicted RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 TMEM139Q8IV31 216 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 INCENPQ9NQS7 918 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 RBM28Q9NW13 759 aaKnown RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 TMEM51Q9NW97 253 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 DUOX1Q9NRD9 1551 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 AKAP17AQ02040 695 aaKnown RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 PDE4BQ07343 736 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 BAG1Q99933 345 aaPredicted RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 INTS13Q9NVM9 706 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 ARGLU1Q9NWB6 273 aaPredicted RBP9.49□□□□□ -0.89
CHD7-202ENST00000524602 LRP2BPQ9P2M1 347 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 NFE2L3Q9Y4A8 694 aa9.49□□□□□ -0.89
CHD7-202ENST00000524602 CALM1P0DP23 149 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 CALM2P0DP24 149 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 CALM3P0DP25 149 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 BMS1Q14692 1282 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 SEC23AQ15436 765 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 RRP12Q5JTH9 1297 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 FERMT2Q96AC1 680 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 C8orf37Q96NL8 207 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 TOMM22Q9NS69 142 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 SERTAD1Q9UHV2 236 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 KCNJ14Q9UNX9 436 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 PPP2R2CQ9Y2T4 447 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 ZNF804BA4D1E1 1349 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 MYH2Q9UKX2 1941 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 EFCAB8A8MWE9 144 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 PRKAB2O43741 272 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 SIK1P57059 783 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 FAM98CQ17RN3 349 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 INTS5Q6P9B9 1019 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 GNL3LQ9NVN8 582 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 PCDHB6Q9Y5E3 794 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 TRIM75PA6NK02 468 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 TMEM232C9JQI7 657 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 SEMA3EO15041 775 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 PRPF3O43395 683 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 KCNQ2O43526 872 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 CRKLP46109 303 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 ITPK1Q13572 414 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 PYM1Q9BRP8 204 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 NAA15Q9BXJ9 866 aaKnown RBP9.48□□□□□ -0.89
CHD7-202ENST00000524602 BRMS1Q9HCU9 246 aa9.48□□□□□ -0.89
CHD7-202ENST00000524602 UBE2Q2LH0YL09 131 aa9.47□□□□□ -0.89
CHD7-202ENST00000524602 KRT2P35908 639 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms