RNA–Protein interactions for RNA: ENST00000524460.1

SNX19-203, Transcript of sorting nexin 19, humanhuman

TSL 5

Gene SNX19, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-203ENST00000524460 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
SNX19-203ENST00000524460 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
SNX19-203ENST00000524460 ZNF287Q9HBT7 754 aa11.31□□□□□ -0.6
SNX19-203ENST00000524460 SERPINB13Q9UIV8 391 aa11.31□□□□□ -0.6
SNX19-203ENST00000524460 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNX19-203ENST00000524460 SCN4AP35499 1836 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 TSPY2A6NKD2 308 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 IFIT3O14879 490 aaKnown RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 ORC4O43929 436 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 PCP11498 1178 aaKnown RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 EPHX2P34913 555 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 HIRAP54198 1017 aaPredicted RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 RASA3Q14644 834 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 APOBEC3FQ8IUX4 373 aaKnown RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 CDAN1Q8IWY9 1227 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 ZNF444Q8N0Y2 327 aaPredicted RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 SPRYD3Q8NCJ5 442 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 BRF1Q92994 677 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 SNX21Q969T3 373 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 IPO9Q96P70 1041 aaKnown RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 PI4KBQ9UBF8 816 aa11.3□□□□□ -0.6
SNX19-203ENST00000524460 COL2A1P02458 1487 aaPredicted RBP11.3□□□□□ -0.6
SNX19-203ENST00000524460 ATRNL1Q5VV63 1379 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 ERICH2A1L162 156 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 IQCA1LA6NCM1 817 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
SNX19-203ENST00000524460 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 RASA1P20936 1047 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 MCM2P49736 904 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 TFAP4Q01664 338 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
SNX19-203ENST00000524460 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 SART3Q15020 963 aaKnown RBP11.29□□□□□ -0.6
SNX19-203ENST00000524460 ANKRD1Q15327 319 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 TMEM67Q5HYA8 995 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 NFXL1Q6ZNB6 911 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 FAM83AQ86UY5 434 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
SNX19-203ENST00000524460 ZSWIM5Q9P217 1185 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 SWAP70Q9UH65 585 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 WDR90Q96KV7 1748 aa11.29□□□□□ -0.6
SNX19-203ENST00000524460 MPHOSPH10O00566 681 aaKnown RBP11.28□□□□□ -0.6
SNX19-203ENST00000524460 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
SNX19-203ENST00000524460 GABBR2O75899 941 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 LARGE1O95461 756 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 STK3Q13188 491 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 TOB2Q14106 344 aaPredicted RBP11.28□□□□□ -0.6
SNX19-203ENST00000524460 WTAPQ15007 396 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 IQCA1Q86XH1 822 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 EHD4Q9H223 541 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNX19-203ENST00000524460 TNKSO95271 1327 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 WDR19Q8NEZ3 1342 aa11.28□□□□□ -0.6
SNX19-203ENST00000524460 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 NMT2O60551 498 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 GDF11O95390 407 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 FGRP09769 529 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 AKR1B1P15121 316 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 SHMT1P34896 483 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 GABPAQ06546 454 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
SNX19-203ENST00000524460 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.61
SNX19-203ENST00000524460 KIF12Q96FN5 646 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 TMX3Q96JJ7 454 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 TMEM87BQ96K49 555 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 ZSCAN10Q96SZ4 725 aaPredicted RBP11.27□□□□□ -0.61
SNX19-203ENST00000524460 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.61
SNX19-203ENST00000524460 DNAJC18Q9H819 358 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.61
SNX19-203ENST00000524460 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
SNX19-203ENST00000524460 CCDC69A6NI79 296 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 GOLGA8BA8MQT2 603 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 ADM5C9JUS6 153 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 IFIT1BQ5T764 474 aaKnown RBP11.26□□□□□ -0.61
SNX19-203ENST00000524460 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 USP50Q70EL3 339 aaPredicted RBP11.26□□□□□ -0.61
SNX19-203ENST00000524460 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 LY9Q9HBG7 655 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 SENP2Q9HC62 589 aa11.26□□□□□ -0.61
SNX19-203ENST00000524460 ATP2B2Q01814 1243 aa11.25□□□□□ -0.61
SNX19-203ENST00000524460 ME3Q16798 604 aa11.25□□□□□ -0.61
SNX19-203ENST00000524460 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
SNX19-203ENST00000524460 CERKLQ49MI3 558 aaPredicted RBP11.25□□□□□ -0.61
SNX19-203ENST00000524460 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
SNX19-203ENST00000524460 KRT26Q7Z3Y9 468 aa11.25□□□□□ -0.61
SNX19-203ENST00000524460 MICU3Q86XE3 530 aa11.25□□□□□ -0.61
SNX19-203ENST00000524460 CLEC10AQ8IUN9 316 aa11.25□□□□□ -0.61
SNX19-203ENST00000524460 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms