RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 NR2E3Q9Y5X4 410 aa14.43□□□□□ -0.1
SPARC-206ENST00000524277 MGAMO43451 1857 aa14.43□□□□□ -0.1
SPARC-206ENST00000524277 USP5P45974 858 aa14.42□□□□□ -0.1
SPARC-206ENST00000524277 TTC6Q86TZ1 520 aa14.42□□□□□ -0.1
SPARC-206ENST00000524277 RPAP2Q8IXW5 612 aaPredicted RBP14.42□□□□□ -0.1
SPARC-206ENST00000524277 EHD4Q9H223 541 aa14.42□□□□□ -0.1
SPARC-206ENST00000524277 MAST2Q6P0Q8 1798 aa14.42□□□□□ -0.1
SPARC-206ENST00000524277 H0YGN5 161 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 HMMRO75330 724 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 FARP2O94887 1054 aaPredicted RBP14.41□□□□□ -0.1
SPARC-206ENST00000524277 TFRCP02786 760 aaKnown RBP14.41□□□□□ -0.1
SPARC-206ENST00000524277 ELNP15502 786 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 MTMR2Q13614 643 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 USP17L2Q6R6M4 530 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 AACSQ86V21 672 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 TRMT44Q8IYL2 757 aaKnown RBP14.41□□□□□ -0.1
SPARC-206ENST00000524277 GPRC5AQ8NFJ5 357 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.41□□□□□ -0.1
SPARC-206ENST00000524277 DNAJC18Q9H819 358 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 PAK6Q9NQU5 681 aaPredicted RBP14.41□□□□□ -0.1
SPARC-206ENST00000524277 TLR7Q9NYK1 1049 aaKnown RBP14.41□□□□□ -0.1
SPARC-206ENST00000524277 SERPINB13Q9UIV8 391 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 TAOK2Q9UL54 1235 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 ZBTB21Q9ULJ3 1066 aa14.41□□□□□ -0.1
SPARC-206ENST00000524277 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 HMGCRP04035 888 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 MAPK4P31152 587 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 USP14P54578 494 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 DYNLL1P63167 89 aaKnown RBP14.4□□□□□ -0.1
SPARC-206ENST00000524277 TATDN1Q6P1N9 297 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 CLASRPQ8N2M8 674 aaKnown RBP14.4□□□□□ -0.1
SPARC-206ENST00000524277 MAGEB6Q8N7X4 407 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 ANKLE1Q8NAG6 615 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 KIF1BPQ96EK5 621 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 P2RX7Q99572 595 aaKnown RBP14.4□□□□□ -0.1
SPARC-206ENST00000524277 CRISPLD2Q9H0B8 497 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 GJD2Q9UKL4 321 aa14.4□□□□□ -0.1
SPARC-206ENST00000524277 COLQQ9Y215 455 aaPredicted RBP14.4□□□□□ -0.1
SPARC-206ENST00000524277 XRCC5P13010 732 aaKnown RBP14.39□□□□□ -0.11
SPARC-206ENST00000524277 HERVK_113P62684 666 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 RHPN1Q8TCX5 695 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 SOCS4Q8WXH5 440 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 DEFB118Q96PH6 123 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 NUDT12Q9BQG2 462 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 CABP5Q9NP86 173 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 SAP30BPQ9UHR5 308 aaKnown RBP14.39□□□□□ -0.11
SPARC-206ENST00000524277 DDX19BQ9UMR2 479 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 EXOC6BQ9Y2D4 811 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 RPTORQ8N122 1335 aa14.39□□□□□ -0.11
SPARC-206ENST00000524277 RAB11FIP3O75154 756 aa14.38□□□□□ -0.11
SPARC-206ENST00000524277 GDF11O95390 407 aa14.38□□□□□ -0.11
SPARC-206ENST00000524277 FXR1P51114 621 aaKnown RBP eCLIP14.38□□□□□ -0.11
SPARC-206ENST00000524277 PDE3AQ14432 1141 aa14.38□□□□□ -0.11
SPARC-206ENST00000524277 CCAR1Q8IX12 1150 aaKnown RBP14.38□□□□□ -0.11
SPARC-206ENST00000524277 MIGA1Q8NAN2 632 aa14.38□□□□□ -0.11
SPARC-206ENST00000524277 PANK1Q8TE04 598 aa14.38□□□□□ -0.11
SPARC-206ENST00000524277 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
SPARC-206ENST00000524277 HMX1Q9NP08 348 aaPredicted RBP14.38□□□□□ -0.11
SPARC-206ENST00000524277 ATAD5Q96QE3 1844 aa14.38□□□□□ -0.11
SPARC-206ENST00000524277 USP17L15C9J2P7 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L13C9JLJ4 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L11C9JVI0 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L18D6R9N7 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L22D6RA61 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L17D6RBQ6 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L19D6RCP7 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L20D6RJB6 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 GH2P01242 217 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 IFIT2P09913 472 aaKnown RBP14.37□□□□□ -0.11
SPARC-206ENST00000524277 CCNA1P78396 465 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 JAG1P78504 1218 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 USP17L24Q0WX57 530 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 CERKLQ49MI3 558 aaPredicted RBP14.37□□□□□ -0.11
SPARC-206ENST00000524277 NECAB2Q7Z6G3 386 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 CRNKL1Q9BZJ0 848 aaKnown RBP14.37□□□□□ -0.11
SPARC-206ENST00000524277 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPARC-206ENST00000524277 RABGAP1Q9Y3P9 1069 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 DOCK3Q8IZD9 2030 aa14.37□□□□□ -0.11
SPARC-206ENST00000524277 FOCADQ5VW36 1801 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 GLRX3O76003 335 aaKnown RBP14.36□□□□□ -0.11
SPARC-206ENST00000524277 ERVK-9P63128 1117 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 ERVK-24P63145 666 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 ABCB5Q2M3G0 1257 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 SLC9C2Q5TAH2 1124 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 FEZ1Q99689 392 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
SPARC-206ENST00000524277 KIAA1683Q9H0B3 1180 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 ANTXR1Q9H6X2 564 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 EMILIN3Q9NT22 766 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 RBPJLQ9UBG7 517 aa14.36□□□□□ -0.11
SPARC-206ENST00000524277 A0A1W2PPC1 479 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 EVI5O60447 810 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 POLR3DP05423 398 aaPredicted RBP14.35□□□□□ -0.11
SPARC-206ENST00000524277 RGS2P41220 211 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 RAB3GAP1Q15042 981 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 IL1RAPL2Q9NP60 686 aa14.35□□□□□ -0.11
SPARC-206ENST00000524277 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms