RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 COA7Q96BR5 231 aa22.91■■□□□ 1.26
PTP4A3-206ENST00000524028 TRIM34Q9BYJ4 488 aa22.91■■□□□ 1.26
PTP4A3-206ENST00000524028 ZBTB21Q9ULJ3 1066 aa22.91■■□□□ 1.26
PTP4A3-206ENST00000524028 CDK5RAP2Q96SN8 1893 aa22.9■■□□□ 1.26
PTP4A3-206ENST00000524028 H0YGN5 161 aa22.9■■□□□ 1.26
PTP4A3-206ENST00000524028 PEX10O60683 326 aa22.9■■□□□ 1.26
PTP4A3-206ENST00000524028 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
PTP4A3-206ENST00000524028 FOCADQ5VW36 1801 aa22.89■■□□□ 1.26
PTP4A3-206ENST00000524028 HLA-DOAP06340 250 aa22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 HOXA7P31268 230 aaPredicted RBP22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 USP5P45974 858 aa22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 MAP3K12Q12852 859 aa22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 P2RX7Q99572 595 aaKnown RBP22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 GINM1Q9NU53 330 aa22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 TMOD4Q9NZQ9 345 aa22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 TAOK2Q9UL54 1235 aa22.89■■□□□ 1.25
PTP4A3-206ENST00000524028 C19orf81C9J6K1 198 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 USP17L10C9JJH3 530 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 SGPL1O95470 568 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 HSP90AB4PQ58FF6 505 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 TATDN1Q6P1N9 297 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 ZBTB40Q9NUA8 1239 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 MORF4L1Q9UBU8 362 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 GJD2Q9UKL4 321 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 COLQQ9Y215 455 aaPredicted RBP22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 COG6Q9Y2V7 657 aa22.88■■□□□ 1.25
PTP4A3-206ENST00000524028 APBB1O00213 710 aa22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 GH2P01242 217 aa22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 IRX3P78415 501 aaPredicted RBP22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 CERS3Q8IU89 383 aa22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 RIOK1Q9BRS2 568 aaKnown RBP22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 TXNRD2Q9NNW7 524 aa22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 EMILIN3Q9NT22 766 aa22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 PCDH10Q9P2E7 1040 aa22.87■■□□□ 1.25
PTP4A3-206ENST00000524028 MS4A1P11836 297 aa22.86■■□□□ 1.25
PTP4A3-206ENST00000524028 POTEEQ6S8J3 1075 aa22.86■■□□□ 1.25
PTP4A3-206ENST00000524028 RPAP2Q8IXW5 612 aaPredicted RBP22.86■■□□□ 1.25
PTP4A3-206ENST00000524028 DPF3Q92784 378 aa22.86■■□□□ 1.25
PTP4A3-206ENST00000524028 TMED8Q6PL24 325 aaPredicted RBP22.85■■□□□ 1.25
PTP4A3-206ENST00000524028 DEFB118Q96PH6 123 aa22.85■■□□□ 1.25
PTP4A3-206ENST00000524028 EHD4Q9H223 541 aa22.85■■□□□ 1.25
PTP4A3-206ENST00000524028 PAK6Q9NQU5 681 aaPredicted RBP22.85■■□□□ 1.25
PTP4A3-206ENST00000524028 SERPINB13Q9UIV8 391 aa22.85■■□□□ 1.25
PTP4A3-206ENST00000524028 FARP2O94887 1054 aaPredicted RBP22.84■■□□□ 1.25
PTP4A3-206ENST00000524028 PLCD1P51178 756 aa22.84■■□□□ 1.25
PTP4A3-206ENST00000524028 HERVK_113P62684 666 aa22.84■■□□□ 1.25
PTP4A3-206ENST00000524028 CLASRPQ8N2M8 674 aaKnown RBP22.84■■□□□ 1.25
PTP4A3-206ENST00000524028 KIF1BPQ96EK5 621 aa22.84■■□□□ 1.25
PTP4A3-206ENST00000524028 RBPJLQ9UBG7 517 aa22.84■■□□□ 1.25
PTP4A3-206ENST00000524028 DDX19BQ9UMR2 479 aa22.84■■□□□ 1.25
PTP4A3-206ENST00000524028 PDE6AP16499 860 aa22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 EVX2Q03828 476 aa22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 TRIM32Q13049 653 aa22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 TTF1Q15361 905 aaPredicted RBP22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 Q3C1V9 767 aa22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 SLC9C2Q5TAH2 1124 aa22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 TTC6Q86TZ1 520 aa22.83■■□□□ 1.25
PTP4A3-206ENST00000524028 DOCK3Q8IZD9 2030 aa22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 MAGEB6P1A0A0J9YX57 407 aa22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 TFRCP02786 760 aaKnown RBP22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 FXR1P51114 621 aaKnown RBP eCLIP22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 GPRC5AQ8NFJ5 357 aa22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 EDC3Q96F86 508 aaKnown RBP22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 CRISPLD2Q9H0B8 497 aa22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 BCL11AQ9H165 835 aa22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 CEP290O15078 2479 aa22.82■■□□□ 1.24
PTP4A3-206ENST00000524028 TCRBV5S4A2TA0A5A2 114 aa22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 GOLIM4O00461 696 aa22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 HMMRO75330 724 aa22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 HMGCRP04035 888 aa22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 IFIT2P09913 472 aaKnown RBP22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 SHMT1P34896 483 aa22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 ZYXQ15942 572 aaKnown RBP22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 CERKLQ49MI3 558 aaPredicted RBP22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 DNAJC2Q99543 621 aaKnown RBP22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 HTATIP2Q9BUP3 242 aa22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.81■■□□□ 1.249e-8■□□□□ 10.7
PTP4A3-206ENST00000524028 ZNF532Q9HCE3 1301 aa22.81■■□□□ 1.24
PTP4A3-206ENST00000524028 RAB3GAP1Q15042 981 aa22.8■■□□□ 1.24
PTP4A3-206ENST00000524028 ABCB5Q2M3G0 1257 aa22.8■■□□□ 1.24
PTP4A3-206ENST00000524028 ACER1Q8TDN7 264 aa22.8■■□□□ 1.24
PTP4A3-206ENST00000524028 TRIB2Q92519 343 aa22.8■■□□□ 1.24
PTP4A3-206ENST00000524028 C12orf42Q96LP6 360 aa22.8■■□□□ 1.24
PTP4A3-206ENST00000524028 MYH1P12882 1939 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 RAB11FIP3O75154 756 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 GUCY1A2P33402 732 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 ERVK-9P63128 1117 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 ERVK-24P63145 666 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 GABPAQ06546 454 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 SLFNL1Q499Z3 407 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 CHRDL2Q6WN34 429 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 PORCNQ9H237 461 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 RCAN3Q9UKA8 241 aa22.79■■□□□ 1.24
PTP4A3-206ENST00000524028 POLR3DP05423 398 aaPredicted RBP22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 CYP2B6P20813 491 aa22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 C20orf194Q5TEA3 1177 aa22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 LCORLQ8N3X6 602 aa22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 FEZ1Q99689 392 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms