RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 MEGF10Q96KG7 1140 aa8.53□□□□□ -1.04
CPS1-211ENST00000523702 FAM221BA6H8Z2 402 aa8.52□□□□□ -1.05
CPS1-211ENST00000523702 GUCY2CP25092 1073 aa8.52□□□□□ -1.05
CPS1-211ENST00000523702 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPS1-211ENST00000523702 UNC5AQ6ZN44 842 aa8.52□□□□□ -1.05
CPS1-211ENST00000523702 NLRC3Q7RTR2 1065 aa8.52□□□□□ -1.05
CPS1-211ENST00000523702 MRPL41Q8IXM3 137 aaKnown RBP8.52□□□□□ -1.05
CPS1-211ENST00000523702 FAM13CQ8NE31 585 aa8.52□□□□□ -1.05
CPS1-211ENST00000523702 FBLIM1Q8WUP2 373 aa8.52□□□□□ -1.05
CPS1-211ENST00000523702 FAM46AQ96IP4 442 aaKnown RBP8.52□□□□□ -1.05
CPS1-211ENST00000523702 ACTR10Q9NZ32 417 aa8.52□□□□□ -1.05
CPS1-211ENST00000523702 CDK11AQ9UQ88 783 aaPredicted RBP8.52□□□□□ -1.05
CPS1-211ENST00000523702 KRBA1A5PL33 1030 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 DYNC1LI2O43237 492 aaPredicted RBP8.51□□□□□ -1.05
CPS1-211ENST00000523702 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 NBPF6Q5VWK0 638 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 SMYD4Q8IYR2 804 aaPredicted RBP8.51□□□□□ -1.05
CPS1-211ENST00000523702 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 XAGE3Q8WTP9 111 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 NBPF4Q96M43 638 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 KIF2CQ99661 725 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 TM9SF2Q99805 663 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 TRIM55Q9BYV6 548 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 ACSS3Q9H6R3 686 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 PIDD1Q9HB75 910 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 PCDHB10Q9UN67 800 aa8.51□□□□□ -1.05
CPS1-211ENST00000523702 B2RBV5 119 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 K7ELQ4 463 aaPredicted RBP8.5□□□□□ -1.05
CPS1-211ENST00000523702 TNFRSF10CO14798 259 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 APBA3O96018 575 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 NFICP08651 508 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 RAB6AP20340 208 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 TNNI3KQ59H18 835 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 PRAMEF13Q5VWM6 474 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 LARP1BQ659C4 914 aaKnown RBP8.5□□□□□ -1.05
CPS1-211ENST00000523702 INTS3Q68E01 1043 aaKnown RBP8.5□□□□□ -1.05
CPS1-211ENST00000523702 SLC6A19Q695T7 634 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 CDC37L1Q7L3B6 337 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.5□□□□□ -1.05
CPS1-211ENST00000523702 RIN3Q8TB24 985 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 BAHD1Q8TBE0 780 aaPredicted RBP8.5□□□□□ -1.05
CPS1-211ENST00000523702 SSU72Q9NP77 194 aaKnown RBP8.5□□□□□ -1.05
CPS1-211ENST00000523702 SIRPGQ9P1W8 387 aa8.5□□□□□ -1.05
CPS1-211ENST00000523702 R3HCC1Q9Y3T6 440 aaKnown RBP8.5□□□□□ -1.05
CPS1-211ENST00000523702 CCDC85CA6NKD9 419 aa8.49□□□□□ -1.05
CPS1-211ENST00000523702 SART1O43290 800 aaKnown RBP8.49□□□□□ -1.05
CPS1-211ENST00000523702 SMARCA5O60264 1052 aaPredicted RBP8.49□□□□□ -1.05
CPS1-211ENST00000523702 CHRNA4P43681 627 aa8.49□□□□□ -1.05
CPS1-211ENST00000523702 USP11P51784 963 aa8.49□□□□□ -1.05
CPS1-211ENST00000523702 NRG1Q02297 640 aaPredicted RBP8.49□□□□□ -1.05
CPS1-211ENST00000523702 MLECQ14165 292 aa8.49□□□□□ -1.05
CPS1-211ENST00000523702 SLFN12Q8IYM2 578 aa8.49□□□□□ -1.05
CPS1-211ENST00000523702 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
CPS1-211ENST00000523702 SEMA6CQ9H3T2 930 aa8.49□□□□□ -1.05
CPS1-211ENST00000523702 PCOLCE2Q9UKZ9 415 aa8.49□□□□□ -1.05
CPS1-211ENST00000523702 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.48□□□□□ -1.05
CPS1-211ENST00000523702 UBOX5O94941 541 aa8.48□□□□□ -1.05
CPS1-211ENST00000523702 CST3P01034 146 aaPredicted RBP8.48□□□□□ -1.05
CPS1-211ENST00000523702 DDR2Q16832 855 aa8.48□□□□□ -1.05
CPS1-211ENST00000523702 TMEM192Q8IY95 271 aa8.48□□□□□ -1.05
CPS1-211ENST00000523702 TAB3Q8N5C8 712 aaPredicted RBP8.48□□□□□ -1.05
CPS1-211ENST00000523702 C19orf47Q8N9M1 422 aaKnown RBP8.48□□□□□ -1.05
CPS1-211ENST00000523702 MSRB2Q9Y3D2 182 aa8.48□□□□□ -1.05
CPS1-211ENST00000523702 DAGLAQ9Y4D2 1042 aa8.48□□□□□ -1.05
CPS1-211ENST00000523702 GJB6O95452 261 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 BMP3P12645 472 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 RAG1P15918 1043 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 CAP2P40123 477 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 RASA3Q14644 834 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 C6orf15Q6UXA7 325 aaPredicted RBP8.47□□□□□ -1.05
CPS1-211ENST00000523702 SEZ6L2Q6UXD5 910 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 CD163Q86VB7 1156 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 PPP1R13LQ8WUF5 828 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 PSMG3-AS1Q96PY0 264 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 SRPK1Q96SB4 655 aaKnown RBP8.47□□□□□ -1.05
CPS1-211ENST00000523702 CEP41Q9BYV8 373 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 FOXQ1Q9C009 403 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 SNTG2Q9NY99 539 aa8.47□□□□□ -1.05
CPS1-211ENST00000523702 C1QTNF9BB2RNN3 333 aa8.46□□□□□ -1.06
CPS1-211ENST00000523702 RGS13O14921 159 aa8.46□□□□□ -1.06
CPS1-211ENST00000523702 GAS2O43903 313 aaKnown RBP8.46□□□□□ -1.06
CPS1-211ENST00000523702 YARSP54577 528 aaKnown RBP8.46□□□□□ -1.06
CPS1-211ENST00000523702 MRM1Q6IN84 353 aaKnown RBP8.46□□□□□ -1.06
CPS1-211ENST00000523702 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.46□□□□□ -1.06
CPS1-211ENST00000523702 ARMCX6Q7L4S7 300 aa8.46□□□□□ -1.06
CPS1-211ENST00000523702 NOP9Q86U38 636 aaKnown RBP8.46□□□□□ -1.06
CPS1-211ENST00000523702 PHACTR4Q8IZ21 702 aa8.46□□□□□ -1.06
CPS1-211ENST00000523702 EZH1Q92800 747 aaPredicted RBP8.46□□□□□ -1.06
CPS1-211ENST00000523702 MKL1Q969V6 931 aa8.46□□□□□ -1.06
CPS1-211ENST00000523702 CNTNAP4Q9C0A0 1308 aa8.46□□□□□ -1.06
CPS1-211ENST00000523702 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
CPS1-211ENST00000523702 DDAH1O94760 285 aa8.45□□□□□ -1.06
CPS1-211ENST00000523702 FXNQ16595 210 aa8.45□□□□□ -1.06
CPS1-211ENST00000523702 ZNF746Q6NUN9 644 aaPredicted RBP8.45□□□□□ -1.06
CPS1-211ENST00000523702 TXNRD3Q86VQ6 643 aa8.45□□□□□ -1.06
CPS1-211ENST00000523702 KCT2Q8NC54 265 aa8.45□□□□□ -1.06
CPS1-211ENST00000523702 KLHL6Q8WZ60 621 aa8.45□□□□□ -1.06
CPS1-211ENST00000523702 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
CPS1-211ENST00000523702 MYRFLQ96LU7 910 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms