RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 FOXQ1Q9C009 403 aa7.45□□□□□ -1.22
NSMCE2-211ENST00000523549 PRDM5Q9NQX1 630 aaPredicted RBP7.45□□□□□ -1.22
NSMCE2-211ENST00000523549 C19orf73Q9NVV2 129 aa7.45□□□□□ -1.22
NSMCE2-211ENST00000523549 SYNJ2O15056 1496 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 PRR33A8MZF0 331 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 ZNF865P0CJ78 1059 aaPredicted RBP7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 AFMP43652 599 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 KRTAP19-4Q3LI73 84 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 LRFN4Q6PJG9 635 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 ARID3AQ99856 593 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 FBRSQ9HAH7 460 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 PICK1Q9NRD5 415 aa7.44□□□□□ -1.22
NSMCE2-211ENST00000523549 BRD1O95696 1058 aa7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 CELA3AP09093 270 aa7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 MLANAQ16655 118 aa7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 LIN37Q96GY3 246 aaPredicted RBP7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 HSPA12BQ96MM6 686 aa7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 WNT10AQ9GZT5 417 aa7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 WWC3Q9ULE0 1092 aa7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 RSF1Q96T23 1441 aaPredicted RBP7.43□□□□□ -1.22
NSMCE2-211ENST00000523549 PCNX4Q63HM2 1172 aa7.42□□□□□ -1.22
NSMCE2-211ENST00000523549 ALG1LQ6GMV1 187 aa7.42□□□□□ -1.22
NSMCE2-211ENST00000523549 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
NSMCE2-211ENST00000523549 ELMO3Q96BJ8 720 aa7.42□□□□□ -1.22
NSMCE2-211ENST00000523549 CARS2Q9HA77 564 aaKnown RBP7.42□□□□□ -1.22
NSMCE2-211ENST00000523549 ATP13A1Q9HD20 1204 aa7.42□□□□□ -1.22
NSMCE2-211ENST00000523549 ST14Q9Y5Y6 855 aa7.42□□□□□ -1.22
NSMCE2-211ENST00000523549 GLI1P08151 1106 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 MAPK8P45983 427 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 NKG7Q16617 165 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 NPAS4Q8IUM7 802 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 MFSD2AQ8NA29 543 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 GAL3ST3Q96A11 431 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 PLPPR2Q96GM1 343 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 SNCAIPQ9Y6H5 919 aa7.41□□□□□ -1.22
NSMCE2-211ENST00000523549 GDNFP39905 211 aa7.4□□□□□ -1.22
NSMCE2-211ENST00000523549 SFRP5Q5T4F7 317 aa7.4□□□□□ -1.22
NSMCE2-211ENST00000523549 ASB16Q96NS5 453 aa7.4□□□□□ -1.22
NSMCE2-211ENST00000523549 C12orf49Q9H741 205 aa7.4□□□□□ -1.22
NSMCE2-211ENST00000523549 CAPN6Q9Y6Q1 641 aa7.4□□□□□ -1.22
NSMCE2-211ENST00000523549 SMARCA4P51532 1647 aa7.4□□□□□ -1.22
NSMCE2-211ENST00000523549 TSPAN15O95858 294 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 KRT1P04264 644 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 CFPP27918 469 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 SV2BQ7L1I2 683 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 HDXQ7Z353 690 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 C1QL4Q86Z23 238 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 MFSD4AQ8N468 514 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 KIRREL1Q96J84 757 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
NSMCE2-211ENST00000523549 PRAMEF27A3QJZ7 478 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 FAM155AB1AL88 458 aaPredicted RBP7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 RBAK-RBAKDNI3L0D1 243 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 CDK8P49336 464 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 CDKAL1Q5VV42 579 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 ERICH6Q7L0X2 663 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 HID1Q8IV36 788 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 ZSCAN29Q8IWY8 852 aaPredicted RBP7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 MIPEPQ99797 713 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 SPG7Q9UQ90 795 aa7.38□□□□□ -1.23
NSMCE2-211ENST00000523549 ADGRL1O94910 1474 aa7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 CST3P01034 146 aaPredicted RBP7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 USP17L7P0C7H9 530 aa7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 RAP1GAPP47736 663 aa7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 FGD1P98174 961 aa7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 THAP5Q7Z6K1 395 aa7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 TPX2Q9ULW0 747 aaKnown RBP7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 ZNF608Q9ULD9 1512 aaPredicted RBP7.37□□□□□ -1.23
NSMCE2-211ENST00000523549 H3BS24 57 aa7.36□□□□□ -1.23
NSMCE2-211ENST00000523549 GFRA2O00451 464 aa7.36□□□□□ -1.23
NSMCE2-211ENST00000523549 TMEM67Q5HYA8 995 aa7.36□□□□□ -1.23
NSMCE2-211ENST00000523549 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
NSMCE2-211ENST00000523549 KRTAP4-2Q9BYR5 136 aa7.36□□□□□ -1.23
NSMCE2-211ENST00000523549 CEP164Q9UPV0 1460 aa7.36□□□□□ -1.23
NSMCE2-211ENST00000523549 SYDE1Q6ZW31 735 aaPredicted RBP7.35□□□□□ -1.23
NSMCE2-211ENST00000523549 FRMD6Q96NE9 622 aa7.35□□□□□ -1.23
NSMCE2-211ENST00000523549 TOX2Q96NM4 488 aa7.35□□□□□ -1.23
NSMCE2-211ENST00000523549 PPP1R16BQ96T49 567 aa7.35□□□□□ -1.23
NSMCE2-211ENST00000523549 TACC3Q9Y6A5 838 aa7.35□□□□□ -1.23
NSMCE2-211ENST00000523549 SUPT5HO00267 1087 aaKnown RBP7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 ETF1P62495 437 aaKnown RBP7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 WIPI1Q5MNZ9 446 aaPredicted RBP7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 PRAMEF13Q5VWM6 474 aa7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 TTBK2Q6IQ55 1244 aa7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 LCNL1Q6ZST4 164 aa7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 UBE2FQ969M7 185 aa7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 COX4I2Q96KJ9 171 aa7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 ALPK1Q96QP1 1244 aa7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 BAZ1BQ9UIG0 1483 aaKnown RBP7.34□□□□□ -1.23
NSMCE2-211ENST00000523549 KDM6BO15054 1643 aa7.34□□□□□ -1.24
NSMCE2-211ENST00000523549 CBX7O95931 251 aa7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 C1QTNF9P0C862 333 aa7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 GRK4P32298 578 aa7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 KIR3DL1P43629 444 aa7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 ATP2B2Q01814 1243 aa7.33□□□□□ -1.24
NSMCE2-211ENST00000523549 TNK2Q07912 1038 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms