RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 USP2O75604 605 aaPredicted RBP13.23□□□□□ -0.29
CDK16-221ENST00000523543 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
CDK16-221ENST00000523543 FMR1Q06787 632 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDK16-221ENST00000523543 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
CDK16-221ENST00000523543 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
CDK16-221ENST00000523543 ZNF444Q8N0Y2 327 aaPredicted RBP13.23□□□□□ -0.29
CDK16-221ENST00000523543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDK16-221ENST00000523543 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDK16-221ENST00000523543 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
CDK16-221ENST00000523543 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
CDK16-221ENST00000523543 WDR19Q8NEZ3 1342 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 TSPY2A6NKD2 308 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 RANBP6O60518 1105 aaKnown RBP13.22□□□□□ -0.29
CDK16-221ENST00000523543 CTNND1O60716 968 aaKnown RBP13.22□□□□□ -0.29
CDK16-221ENST00000523543 AKR1B1P15121 316 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
CDK16-221ENST00000523543 CAP2P40123 477 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 ANTXR2P58335 489 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 FKBP1BP68106 108 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 JAG1P78504 1218 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 TFAP4Q01664 338 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 EXOSC10Q01780 885 aaKnown RBP13.22□□□□□ -0.29
CDK16-221ENST00000523543 FSTL1Q12841 308 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 SHROOM1Q2M3G4 852 aaPredicted RBP13.22□□□□□ -0.29
CDK16-221ENST00000523543 NOL9Q5SY16 702 aaKnown RBP13.22□□□□□ -0.29
CDK16-221ENST00000523543 BLOC1S2Q6QNY1 142 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 CYB5R4Q7L1T6 521 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 DHX32Q7L7V1 743 aaKnown RBP13.22□□□□□ -0.29
CDK16-221ENST00000523543 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 WRNIP1Q96S55 665 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 MTA3Q9BTC8 594 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 TCP11L1Q9NUJ3 509 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 ZSWIM5Q9P217 1185 aa13.22□□□□□ -0.29
CDK16-221ENST00000523543 POLR2AP24928 1970 aaKnown RBP13.21□□□□□ -0.29
CDK16-221ENST00000523543 CELF2O95319 508 aaKnown RBP13.21□□□□□ -0.29
CDK16-221ENST00000523543 GDF11O95390 407 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 TSPY3P0CV98 308 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 TSPY8P0CW00 308 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 RPS6KB1P23443 525 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 INPP5BP32019 993 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 MCM5P33992 734 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 IREB2P48200 963 aaKnown RBP13.21□□□□□ -0.29
CDK16-221ENST00000523543 NOVP48745 357 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 RABEP1Q15276 862 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 ABCB5Q2M3G0 1257 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 FAM47AQ5JRC9 791 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 TMEM179Q6ZVK1 233 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 RUFY3Q7L099 469 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 FBXL16Q8N461 479 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 ZBTB21Q9ULJ3 1066 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 FZD1Q9UP38 647 aa13.21□□□□□ -0.29
CDK16-221ENST00000523543 PAPPA2Q9BXP8 1791 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 UNCXA6NJT0 531 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 PRC1O43663 620 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 GH2P01242 217 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 ASNSP08243 561 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 CPA1P15085 419 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 GUCY1A2P33402 732 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 MAP3K9P80192 1104 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 LDLRAD1Q5T700 205 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 CST9Q5W186 159 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.2□□□□□ -0.3
CDK16-221ENST00000523543 ARMC9Q7Z3E5 817 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 IQCA1Q86XH1 822 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 IL27Q8NEV9 243 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 TTC14Q96N46 770 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 UPF3BQ9BZI7 483 aaKnown RBP13.2□□□□□ -0.3
CDK16-221ENST00000523543 GBA2Q9HCG7 927 aaPredicted RBP13.2□□□□□ -0.3
CDK16-221ENST00000523543 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
CDK16-221ENST00000523543 CYP46A1Q9Y6A2 500 aa13.2□□□□□ -0.3
CDK16-221ENST00000523543 MPHOSPH10O00566 681 aaKnown RBP13.19□□□□□ -0.3
CDK16-221ENST00000523543 PRKG1Q13976 671 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 VGLL4Q14135 290 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 SEPT2Q15019 361 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 CCDC178Q5BJE1 867 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 MOB2Q70IA6 237 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 SCYL3Q8IZE3 742 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 IGDCC4Q8TDY8 1250 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 ANKS1AQ92625 1134 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 ZKSCAN4Q969J2 545 aaPredicted RBP13.19□□□□□ -0.3
CDK16-221ENST00000523543 CEP95Q96GE4 821 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 ZSCAN10Q96SZ4 725 aaPredicted RBP13.19□□□□□ -0.3
CDK16-221ENST00000523543 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 ZNF408Q9H9D4 720 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 CABP5Q9NP86 173 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 MTMR4Q9NYA4 1195 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 SNCAIPQ9Y6H5 919 aa13.19□□□□□ -0.3
CDK16-221ENST00000523543 TNKSO95271 1327 aa13.18□□□□□ -0.3
CDK16-221ENST00000523543 GREB1LQ9C091 1923 aaPredicted RBP13.18□□□□□ -0.3
CDK16-221ENST00000523543 SH2B2O14492 632 aaPredicted RBP13.18□□□□□ -0.3
CDK16-221ENST00000523543 NMT2O60551 498 aa13.18□□□□□ -0.3
CDK16-221ENST00000523543 ICA1Q05084 483 aa13.18□□□□□ -0.3
CDK16-221ENST00000523543 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
CDK16-221ENST00000523543 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
CDK16-221ENST00000523543 SEC23AQ15436 765 aa13.18□□□□□ -0.3
CDK16-221ENST00000523543 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
CDK16-221ENST00000523543 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms