RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 PSMC4P43686 418 aa20.8■□□□□ 0.92
CCNC-213ENST00000523541 BACE1P56817 501 aa20.8■□□□□ 0.92
CCNC-213ENST00000523541 CAP1Q01518 475 aa20.8■□□□□ 0.92
CCNC-213ENST00000523541 KBTBD3Q8NAB2 608 aa20.8■□□□□ 0.92
CCNC-213ENST00000523541 DCP1AQ9NPI6 582 aaPredicted RBP20.8■□□□□ 0.92
CCNC-213ENST00000523541 FOCADQ5VW36 1801 aa20.8■□□□□ 0.92
CCNC-213ENST00000523541 MYCP01106 439 aaPredicted RBP20.79■□□□□ 0.92
CCNC-213ENST00000523541 BCRP11274 1271 aa20.79■□□□□ 0.92
CCNC-213ENST00000523541 DDRGK1Q96HY6 314 aa20.79■□□□□ 0.92
CCNC-213ENST00000523541 TMEM106CQ9BVX2 250 aa20.79■□□□□ 0.92
CCNC-213ENST00000523541 MCM9Q9NXL9 1143 aa20.79■□□□□ 0.92
CCNC-213ENST00000523541 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
CCNC-213ENST00000523541 ATAD5Q96QE3 1844 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 USP17L10C9JJH3 530 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 GLRX3O76003 335 aaKnown RBP20.78■□□□□ 0.92
CCNC-213ENST00000523541 HMGCS2P54868 508 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 GABPAQ06546 454 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 CERKLQ49MI3 558 aaPredicted RBP20.78■□□□□ 0.92
CCNC-213ENST00000523541 AMOTL1Q8IY63 956 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 LCORLQ8N3X6 602 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 CABP5Q9NP86 173 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 TMOD4Q9NZQ9 345 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 SWAP70Q9UH65 585 aa20.78■□□□□ 0.92
CCNC-213ENST00000523541 CDK5RAP2Q96SN8 1893 aa20.77■□□□□ 0.92
CCNC-213ENST00000523541 MBD4O95243 580 aa20.77■□□□□ 0.92
CCNC-213ENST00000523541 GDF11O95390 407 aa20.77■□□□□ 0.92
CCNC-213ENST00000523541 OSBPP22059 807 aa20.77■□□□□ 0.92
CCNC-213ENST00000523541 HOXA7P31268 230 aaPredicted RBP20.77■□□□□ 0.92
CCNC-213ENST00000523541 GCLCP48506 637 aaPredicted RBP20.77■□□□□ 0.92
CCNC-213ENST00000523541 PLCD1P51178 756 aa20.77■□□□□ 0.92
CCNC-213ENST00000523541 FCGRTP55899 365 aa20.77■□□□□ 0.92
CCNC-213ENST00000523541 ARMT1Q9H993 441 aa20.77■□□□□ 0.92
CCNC-213ENST00000523541 ZSWIM8A7E2V4 1837 aa20.76■□□□□ 0.91
CCNC-213ENST00000523541 TICAM2Q86XR7 235 aa20.76■□□□□ 0.91
CCNC-213ENST00000523541 RAET1EQ8TD07 263 aa20.76■□□□□ 0.91
CCNC-213ENST00000523541 ARMC5Q96C12 935 aa20.76■□□□□ 0.91
CCNC-213ENST00000523541 RWDD1Q9H446 243 aaPredicted RBP20.76■□□□□ 0.91
CCNC-213ENST00000523541 PHIPQ8WWQ0 1821 aa20.76■□□□□ 0.91
CCNC-213ENST00000523541 HTTP42858 3142 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 GH2P01242 217 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 JAG1P78504 1218 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 ABCB5Q2M3G0 1257 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 TREML2Q5T2D2 321 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 GIMAP6Q6P9H5 292 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 SH3TC2Q8TF17 1288 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 SDR42E1Q8WUS8 393 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 TRIM47Q96LD4 638 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 MYPNQ86TC9 1320 aa20.75■□□□□ 0.91
CCNC-213ENST00000523541 RNF113AO15541 343 aaKnown RBP20.74■□□□□ 0.91
CCNC-213ENST00000523541 MX1P20591 662 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 SHMT1P34896 483 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 USP14P54578 494 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 MTMR2Q13614 643 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 ANKRD45Q5TZF3 282 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 USP17L2Q6R6M4 530 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 APPBP2Q92624 585 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
CCNC-213ENST00000523541 BIN2Q9UBW5 565 aaPredicted RBP20.74■□□□□ 0.91
CCNC-213ENST00000523541 SRRDQ9UH36 339 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 PTPRFP10586 1907 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 MYH1P12882 1939 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 SIPA1L1O43166 1804 aa20.74■□□□□ 0.91
CCNC-213ENST00000523541 POTEFA5A3E0 1075 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 GNAT2P19087 354 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 FAM110CQ1W6H9 321 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 C12orf60Q5U649 245 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 PI4K2BQ8TCG2 481 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 CCDC17Q96LX7 622 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 STRBPQ96SI9 672 aaKnown RBP20.73■□□□□ 0.91
CCNC-213ENST00000523541 STAP2Q9UGK3 403 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 SLC4A4Q9Y6R1 1079 aa20.73■□□□□ 0.91
CCNC-213ENST00000523541 IRX3P78415 501 aaPredicted RBP20.72■□□□□ 0.91
CCNC-213ENST00000523541 ANKRD13CQ8N6S4 541 aa20.72■□□□□ 0.91
CCNC-213ENST00000523541 GTF3C2Q8WUA4 911 aaPredicted RBP20.72■□□□□ 0.91
CCNC-213ENST00000523541 ZNF333Q96JL9 665 aa20.72■□□□□ 0.91
CCNC-213ENST00000523541 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
CCNC-213ENST00000523541 FEZ1Q99689 392 aa20.72■□□□□ 0.91
CCNC-213ENST00000523541 KIAA1683Q9H0B3 1180 aa20.72■□□□□ 0.91
CCNC-213ENST00000523541 ASCC2Q9H1I8 757 aaPredicted RBP20.72■□□□□ 0.91
CCNC-213ENST00000523541 TNPO2O14787 897 aaKnown RBP20.71■□□□□ 0.91
CCNC-213ENST00000523541 PRKAB2O43741 272 aa20.71■□□□□ 0.91
CCNC-213ENST00000523541 CTGFP29279 349 aa20.71■□□□□ 0.91
CCNC-213ENST00000523541 RAB3GAP1Q15042 981 aa20.71■□□□□ 0.91
CCNC-213ENST00000523541 ARPP21Q9UBL0 812 aaPredicted RBP20.71■□□□□ 0.91
CCNC-213ENST00000523541 SALL3Q9BXA9 1300 aa20.71■□□□□ 0.91
CCNC-213ENST00000523541 USP17L12C9JPN9 530 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 USP17L21D6R901 530 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 PRKCZQ05513 592 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 SHROOM1Q2M3G4 852 aaPredicted RBP20.7■□□□□ 0.9
CCNC-213ENST00000523541 SLFNL1Q499Z3 407 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 SBK1Q52WX2 424 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 TMEM179Q6ZVK1 233 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 SMC5Q8IY18 1101 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 EMILIN3Q9NT22 766 aa20.7■□□□□ 0.9
CCNC-213ENST00000523541 CENPFP49454 3210 aa20.69■□□□□ 0.9
CCNC-213ENST00000523541 NAV1Q8NEY1 1877 aa20.69■□□□□ 0.9
CCNC-213ENST00000523541 MPHOSPH10O00566 681 aaKnown RBP20.69■□□□□ 0.9
CCNC-213ENST00000523541 GRK4P32298 578 aa20.69■□□□□ 0.9
CCNC-213ENST00000523541 ZYXQ15942 572 aaKnown RBP20.69■□□□□ 0.9
CCNC-213ENST00000523541 TSHZ3Q63HK5 1081 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms