RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DNAI1Q9UI46 699 aa14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 ZHX1Q9UKY1 873 aaPredicted RBP14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 ERLIN2O94905 339 aa14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 NOP2P46087 812 aaKnown RBP14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 ADCY7P51828 1080 aa14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 NSUN7Q8NE18 718 aaKnown RBP14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 PPEF1O14829 653 aaPredicted RBP14.77□□□□□ -0.05
PCDHGB1-201ENST00000523390 ATP10DQ9P241 1426 aa14.77□□□□□ -0.05
PCDHGB1-201ENST00000523390 CHMP2AO43633 222 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 POTEJP0CG39 1038 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 CCT6AP40227 531 aaKnown RBP14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 PLCD1P51178 756 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 TMCO3Q6UWJ1 677 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 REXO1Q8N1G1 1221 aaKnown RBP14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 BCS1LQ9Y276 419 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 GOLGA6L9A6NEM1 432 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 SEMA3EO15041 775 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 SV2BQ7L1I2 683 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 KRT25Q7Z3Z0 450 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 GPKOWQ92917 476 aaPredicted RBP eCLIP14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 DEPDC5O75140 1603 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 KLRF2D3W0D1 207 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 FAM13AO94988 1023 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 RXRBP28702 533 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 NF2P35240 595 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 UBXN1Q04323 297 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 CNKSR1Q969H4 720 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 DBNDD1Q9H9R9 158 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 COL15A1P39059 1388 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 FRMPD2Q68DX3 1309 aaPredicted RBP14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 BBOX1O75936 387 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 ARID5AQ03989 594 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 CELF1Q92879 486 aaKnown RBP14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 NARFQ9UHQ1 456 aa14.76□□□□□ -0.05
PCDHGB1-201ENST00000523390 SMCO2A6NFE2 343 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 PAFAH1B1P43034 410 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 PDE4DQ08499 809 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 ADALQ6DHV7 355 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 CCDC102AQ96A19 550 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 LZTS2Q9BRK4 669 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 CEP170BQ9Y4F5 1589 aaPredicted RBP14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 PPLO60437 1756 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 PFKFB1P16118 471 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 FOXO4P98177 505 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 BSDC1Q9NW68 430 aaPredicted RBP14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 LRWD1Q9UFC0 647 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 CTNND2Q9UQB3 1225 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 TMCO5BA8MYB1 307 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 CYP2E1P05181 493 aaPredicted RBP14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 CCDC174Q6PII3 467 aa14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 BIN2Q9UBW5 565 aaPredicted RBP14.75□□□□□ -0.05
PCDHGB1-201ENST00000523390 BICDL2A1A5D9 508 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 EIF3JO75822 258 aaKnown RBP14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 CFBP00751 764 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 TBC1D9BQ66K14 1250 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 VPS16Q9H269 839 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 ZSWIM5Q9P217 1185 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 TCP10L2B9ZVM9 353 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 GRM1Q13255 1194 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 SNX29Q8TEQ0 813 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 SERTAD1Q9UHV2 236 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 PCDHA7Q9UN72 937 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 MMP10P09238 476 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 SCG2P13521 617 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 CYLC1P35663 651 aaPredicted RBP14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 DRC1Q96MC2 740 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 CLIC6Q96NY7 704 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 FTOQ9C0B1 505 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 PICK1Q9NRD5 415 aa14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
PCDHGB1-201ENST00000523390 USP17L8P0C7I0 530 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 TRIM28Q13263 835 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 GRAPQ13588 217 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 POSTNQ15063 836 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 HS2ST1Q7LGA3 356 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 GRAPLQ8TC17 118 aaPredicted RBP14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 FERMT2Q96AC1 680 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 STRBPQ96SI9 672 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 JADE2Q9NQC1 790 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 NFE2L3Q9Y4A8 694 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 CLIC4Q9Y696 253 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 GOLGA6L10A6NI86 522 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 PNOCQ13519 176 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 TRMT44Q8IYL2 757 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 BLIDQ8IZY5 108 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 MACROD2A1Z1Q3 448 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 BACH1O14867 736 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 INF2Q27J81 1249 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 ALS2CR12Q96Q35 445 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 HOMER2Q9NSB8 354 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 CDHR2Q9BYE9 1310 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 TRAF5O00463 557 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 KRT13P13646 458 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 MECOMQ03112 1051 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 KARSQ15046 597 aaKnown RBP14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 HS1BP3Q53T59 392 aa14.73□□□□□ -0.05
PCDHGB1-201ENST00000523390 ARHGEF1Q92888 912 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms