RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZBTB7BO15156 539 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-210ENST00000522843 EPHX2P34913 555 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 MTHFSP49914 203 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 TBC1D8BQ0IIM8 1120 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 TRIM26Q12899 539 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-210ENST00000522843 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 CYP4F22Q6NT55 531 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 SHISA2Q6UWI4 295 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 CAPNS2Q96L46 248 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 TSPAN10Q9H1Z9 355 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-210ENST00000522843 IGFLR1Q9H665 355 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 EFCC1Q9HA90 598 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 ABT1Q9ULW3 272 aaKnown RBP9.17□□□□□ -0.94
SDCBP-210ENST00000522843 SLC6A14Q9UN76 642 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
SDCBP-210ENST00000522843 RNF123Q5XPI4 1314 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 USP17L5A8MUK1 530 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 AOC2O75106 756 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 PLEKHO1Q53GL0 409 aaPredicted RBP9.16□□□□□ -0.94
SDCBP-210ENST00000522843 TBC1D9BQ66K14 1250 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 CCDC102BQ68D86 513 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 PRPF40BQ6NWY9 871 aaKnown RBP9.16□□□□□ -0.94
SDCBP-210ENST00000522843 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 NUDT8Q8WV74 236 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 DDX21Q9NR30 783 aaKnown RBP eCLIP9.16□□□□□ -0.94
SDCBP-210ENST00000522843 HACL1Q9UJ83 578 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 SCN11AQ9UI33 1791 aa9.16□□□□□ -0.94
SDCBP-210ENST00000522843 AFF1P51825 1210 aaKnown RBP9.15□□□□□ -0.94
SDCBP-210ENST00000522843 SLC39A6Q13433 755 aa9.15□□□□□ -0.94
SDCBP-210ENST00000522843 CST9Q5W186 159 aa9.15□□□□□ -0.94
SDCBP-210ENST00000522843 OLFM4Q6UX06 510 aa9.15□□□□□ -0.94
SDCBP-210ENST00000522843 GPR101Q96P66 508 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-210ENST00000522843 SSBP4Q9BWG4 385 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-210ENST00000522843 COL4A5P29400 1685 aa9.14□□□□□ -0.95
SDCBP-210ENST00000522843 SRGNP10124 158 aa9.14□□□□□ -0.95
SDCBP-210ENST00000522843 PDE6BP35913 854 aa9.14□□□□□ -0.95
SDCBP-210ENST00000522843 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
SDCBP-210ENST00000522843 EIF5P55010 431 aaKnown RBP9.14□□□□□ -0.95
SDCBP-210ENST00000522843 GRM1Q13255 1194 aa9.14□□□□□ -0.95
SDCBP-210ENST00000522843 FMR1NBQ8N0W7 255 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-210ENST00000522843 LGR6Q9HBX8 967 aa9.14□□□□□ -0.95
SDCBP-210ENST00000522843 ZNF277Q9NRM2 450 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-210ENST00000522843 MRC1P22897 1456 aa9.14□□□□□ -0.95
SDCBP-210ENST00000522843 SCN7AQ01118 1682 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 TRAF5O00463 557 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 CANXP27824 592 aaKnown RBP9.13□□□□□ -0.95
SDCBP-210ENST00000522843 DGKZQ13574 1117 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 AMOTQ4VCS5 1084 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 STYK1Q6J9G0 422 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 BTLAQ7Z6A9 289 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 DMRTC2Q8IXT2 367 aaPredicted RBP9.13□□□□□ -0.95
SDCBP-210ENST00000522843 UCN2Q96RP3 112 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 SLC52A2Q9HAB3 445 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 SNED1Q8TER0 1413 aa9.13□□□□□ -0.95
SDCBP-210ENST00000522843 M0R2N6 131 aa9.12□□□□□ -0.95
SDCBP-210ENST00000522843 FZD9O00144 591 aa9.12□□□□□ -0.95
SDCBP-210ENST00000522843 SOX10P56693 466 aa9.12□□□□□ -0.95
SDCBP-210ENST00000522843 FKBP4Q02790 459 aaKnown RBP eCLIP9.12□□□□□ -0.95
SDCBP-210ENST00000522843 PSAPL1Q6NUJ1 521 aa9.12□□□□□ -0.95
SDCBP-210ENST00000522843 PNMA8AQ86V59 439 aaPredicted RBP9.12□□□□□ -0.95
SDCBP-210ENST00000522843 TRPM7Q96QT4 1865 aa9.12□□□□□ -0.95
SDCBP-210ENST00000522843 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-210ENST00000522843 MAP2K2P36507 400 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 ECE1P42892 770 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 TNNT2P45379 298 aaPredicted RBP9.11□□□□□ -0.95
SDCBP-210ENST00000522843 CLDN10P78369 228 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 HIF1AQ16665 826 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 C1orf141Q5JVX7 400 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 PLEKHM2Q8IWE5 1019 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 MASTLQ96GX5 879 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 GSX2Q9BZM3 304 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 DNAJB12Q9NXW2 375 aaKnown RBP9.11□□□□□ -0.95
SDCBP-210ENST00000522843 UBR2Q8IWV8 1755 aa9.11□□□□□ -0.95
SDCBP-210ENST00000522843 PPP1R12BO60237 982 aaPredicted RBP9.1□□□□□ -0.95
SDCBP-210ENST00000522843 EPS15P42566 896 aa9.1□□□□□ -0.95
SDCBP-210ENST00000522843 CCDC93Q567U6 631 aa9.1□□□□□ -0.95
SDCBP-210ENST00000522843 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
SDCBP-210ENST00000522843 ALDH16A1Q8IZ83 802 aa9.1□□□□□ -0.95
SDCBP-210ENST00000522843 GPC2Q8N158 579 aa9.1□□□□□ -0.95
SDCBP-210ENST00000522843 LARGE2Q8N3Y3 721 aa9.1□□□□□ -0.95
SDCBP-210ENST00000522843 RNMTO43148 476 aaKnown RBP9.09□□□□□ -0.95
SDCBP-210ENST00000522843 CAMTA2O94983 1202 aa9.09□□□□□ -0.95
SDCBP-210ENST00000522843 IARSP41252 1262 aaKnown RBP9.09□□□□□ -0.95
SDCBP-210ENST00000522843 SAPCD2Q86UD0 394 aa9.09□□□□□ -0.95
SDCBP-210ENST00000522843 SLC51AQ86UW1 340 aa9.09□□□□□ -0.95
SDCBP-210ENST00000522843 DTWD1Q8N5C7 304 aa9.09□□□□□ -0.95
SDCBP-210ENST00000522843 CNBD1Q8NA66 436 aa9.09□□□□□ -0.95
SDCBP-210ENST00000522843 PNMA5Q96PV4 448 aa9.09□□□□□ -0.95
SDCBP-210ENST00000522843 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.09□□□□□ -0.95
SDCBP-210ENST00000522843 BCORQ6W2J9 1755 aa9.09□□□□□ -0.95
SDCBP-210ENST00000522843 KLRG2A4D1S0 409 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-210ENST00000522843 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 PALM3A6NDB9 673 aaPredicted RBP9.08□□□□□ -0.96
SDCBP-210ENST00000522843 CA12O43570 354 aa9.08□□□□□ -0.96
SDCBP-210ENST00000522843 AKAP4Q5JQC9 854 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms