RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 FAM25EA8MYX2 175 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 B3GALNT1O75752 331 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 CNGA1P29973 690 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 KIF11P52732 1056 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 MKRN4PQ13434 485 aaPredicted RBP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 CUL4AQ13619 759 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 ARID5BQ14865 1188 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 EMC10Q5UCC4 262 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 CCSAPQ6IQ19 270 aaPredicted RBP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 CHD1LQ86WJ1 897 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 FUKQ8N0W3 1084 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 STK11IPQ8N1F8 1099 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 KIAA1958Q8N8K9 716 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 RASSF8Q8NHQ8 419 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 ERP27Q96DN0 273 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 WDR35Q9P2L0 1181 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 ATXN10Q9UBB4 475 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 GGA2Q9UJY4 613 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 TMCO1Q9UM00 188 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 C15orf41Q9Y2V0 281 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 TMED5Q9Y3A6 229 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 DISP1Q96F81 1524 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-204ENST00000522796 PHACTR2O75167 634 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 ITIH3Q06033 890 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 KCTD2Q14681 263 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 MSL1Q68DK7 614 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 NCCRP1Q6ZVX7 275 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-204ENST00000522796 HOMER1Q86YM7 354 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 RPS6KC1Q96S38 1066 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 MPHOSPH8Q99549 860 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 TCHPQ9BT92 498 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 CARD11Q9BXL7 1154 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 OXCT2Q9BYC2 517 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-204ENST00000522796 DCAF16Q9NXF7 216 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 ZFATQ9P243 1243 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 KIAA1468Q9P260 1216 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-204ENST00000522796 SLC30A1Q9Y6M5 507 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 NUTM2FA1L443 756 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 SGTAO43765 313 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 TUBBP07437 444 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 CTCFP49711 727 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-204ENST00000522796 CTAG1AP78358 180 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 PPFIA1Q13136 1202 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 CBX3Q13185 183 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 CNGA3Q16281 694 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 MAP3K11Q16584 847 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 CRELD2Q6UXH1 353 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-204ENST00000522796 MSANTD4Q8NCY6 345 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
HMGB4-204ENST00000522796 PPP1R14BQ96C90 147 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 MAP3K14Q99558 947 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 ERBINQ96RT1 1412 aa9.28□□□□□ -0.92
HMGB4-204ENST00000522796 ABLIM1O14639 778 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 LSM1O15116 133 aaKnown RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 ALDH3A1P30838 453 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 PSMC4P43686 418 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 ACCSLQ4AC99 568 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 RELL1Q8IUW5 271 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 SH3TC2Q8TF17 1288 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 QTRT2Q9H974 415 aaKnown RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 HELLSQ9NRZ9 838 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 IMPACTQ9P2X3 320 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 EVI5O60447 810 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 BUB1BO60566 1050 aaPredicted RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 TMCC1O94876 653 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 OXCT1P55809 520 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 ARPC4P59998 168 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 SPDYCQ5MJ68 293 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 TRIM65Q6PJ69 517 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 SLC15A3Q8IY34 581 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 MAIP1Q8WWC4 291 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 OPTNQ96CV9 577 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 TBC1D31Q96DN5 1066 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 ZNF512BQ96KM6 892 aaPredicted RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 ZCWPW1Q9H0M4 648 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 OSBPL5Q9H0X9 879 aaPredicted RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 SYNCQ9H7C4 482 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 PCMTD2Q9NV79 361 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 DDX25Q9UHL0 483 aaKnown RBP9.27□□□□□ -0.93
HMGB4-204ENST00000522796 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
HMGB4-204ENST00000522796 FANCD2Q9BXW9 1451 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 SHANK2Q9UPX8 1470 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 YTHDC2Q9H6S0 1430 aaKnown RBP9.26□□□□□ -0.93
HMGB4-204ENST00000522796 GRIN2DO15399 1336 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 GPR75-ASB3A0A0A6YYF3 556 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 RASSF10A6NK89 507 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 GOLGA8AA7E2F4 631 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 ATP9BO43861 1147 aa9.26□□□□□ -0.93
HMGB4-204ENST00000522796 KDM1AO60341 852 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms