RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 FAM205CA6NFA0 338 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 USP27XA6NNY8 438 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PLEKHA8P1O95397 391 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 FUT2Q10981 343 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PKN1Q16512 942 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 AATFQ9NY61 560 aaKnown RBP eCLIP12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 VPS54Q9P1Q0 977 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 BTAF1O14981 1849 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 SKILP12757 684 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ATP1A3P13637 1013 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 HIBADHP31937 336 aaKnown RBP12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 IFIT1BQ5T764 474 aaKnown RBP12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PDCL3Q9H2J4 239 aa12.38□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ZPR1O75312 459 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PTPREP23469 700 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 RILPL1Q5EBL4 403 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CABP5Q9NP86 173 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 SEMA3EO15041 775 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 NMT2O60551 498 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 FGRP09769 529 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CYP2D6P10635 497 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 EARS2Q5JPH6 523 aaKnown RBP12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ZNF710Q8N1W2 664 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
RAB11FIP1-204ENST00000522774 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 RGL2O15211 777 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 NEMFO60524 1076 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TNNT1P13805 278 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TM4SF1P30408 202 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TROAPQ12815 778 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TPD52L1Q16890 204 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CATIPQ7Z7H3 387 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CCNL1Q9UK58 526 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 IKBKBO14920 756 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 BMP6P22004 513 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TMC6Q7Z403 805 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 IQCA1Q86XH1 822 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 BAZ2BQ9UIF8 2168 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 DLEC1Q9Y238 1755 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TNRC6CQ9HCJ0 1690 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 FANCCQ00597 558 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PDE4BQ07343 736 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
RAB11FIP1-204ENST00000522774 WNT7AO00755 349 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 POLR2DO15514 142 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TOM1O60784 492 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 NOM1Q5C9Z4 860 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 GRAMD1CQ8IYS0 662 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PHF20Q9BVI0 1012 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 SERTAD1Q9UHV2 236 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TPM4P67936 248 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ARMCX5Q6P1M9 558 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 DPF2Q92785 391 aa12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CRNKL1Q9BZJ0 848 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 RTCBQ9Y3I0 505 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 SRPRBQ9Y5M8 271 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP1-204ENST00000522774 GSDMDP57764 484 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 MYL5Q02045 173 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PDILTQ8N807 584 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 LAMB1P07942 1786 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TMTC3Q6ZXV5 915 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 TRMT1Q9NXH9 659 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ORC4O43929 436 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 PCP11498 1178 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 KRT2P35908 639 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 POSTNQ15063 836 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 NPY5RQ15761 445 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 SRBD1Q8N5C6 995 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 RBM28Q9NW13 759 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 MAN1B1Q9UKM7 699 aa12.34□□□□□ -0.43
RAB11FIP1-204ENST00000522774 ZNF827Q17R98 1081 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 NHSQ6T4R5 1651 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 MAST2Q6P0Q8 1798 aa12.33□□□□□ -0.44
RAB11FIP1-204ENST00000522774 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms