RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 USP4Q13107 963 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 GNASQ5JWF2 1037 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 SLC10A5Q5PT55 438 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 HDGFL1Q5TGJ6 251 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 TMEM214Q6NUQ4 689 aaKnown RBP8.07□□□□□ -1.12
PABPC1-220ENST00000522658 COPS6Q7L5N1 327 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 NLRP10Q86W26 655 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 RHBDD1Q8TEB9 315 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 ZC3H12CQ9C0D7 883 aaKnown RBP8.07□□□□□ -1.12
PABPC1-220ENST00000522658 RUBCNLQ9H714 662 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 BABAM1Q9NWV8 329 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 GGA3Q9NZ52 723 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 ADM5C9JUS6 153 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 C2CD2LO14523 706 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 TRPA1O75762 1119 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 UFL1O94874 794 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 HOXB4P17483 251 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-220ENST00000522658 NF2P35240 595 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 TCIRG1Q13488 830 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 CTU1Q7Z7A3 348 aaKnown RBP8.06□□□□□ -1.12
PABPC1-220ENST00000522658 SLC51AQ86UW1 340 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 GALNT6Q8NCL4 622 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 CRISPLD1Q9H336 500 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 PGAP2Q9UHJ9 254 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 GDF2Q9UK05 429 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-220ENST00000522658 ATXN7L1Q9ULK2 861 aaPredicted RBP8.06□□□□□ -1.12
PABPC1-220ENST00000522658 DOLKQ9UPQ8 538 aa8.06□□□□□ -1.12
PABPC1-220ENST00000522658 LAMB2P55268 1798 aa8.05□□□□□ -1.12
PABPC1-220ENST00000522658 YDJCA8MPS7 323 aa8.05□□□□□ -1.12
PABPC1-220ENST00000522658 KIF23Q02241 960 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-220ENST00000522658 WDR43Q15061 677 aaKnown RBP eCLIP8.05□□□□□ -1.12
PABPC1-220ENST00000522658 PROSER3Q2NL68 480 aa8.05□□□□□ -1.12
PABPC1-220ENST00000522658 ZNF428Q96B54 188 aa8.05□□□□□ -1.12
PABPC1-220ENST00000522658 GGA1Q9UJY5 639 aa8.05□□□□□ -1.12
PABPC1-220ENST00000522658 CASP8AP2Q9UKL3 1982 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 LRRC37AA6NMS7 1700 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-220ENST00000522658 BNIP3LO60238 219 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 ADAM23O75077 832 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-220ENST00000522658 CCDC152Q4G0S7 254 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 PGBD3Q8N328 593 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 PLBD2Q8NHP8 589 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 EDARADDQ8WWZ3 215 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 PLEKHF1Q96S99 279 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 DNAAF2Q9NVR5 837 aaKnown RBP8.04□□□□□ -1.12
PABPC1-220ENST00000522658 CHPF2Q9P2E5 772 aa8.04□□□□□ -1.12
PABPC1-220ENST00000522658 DBF4Q9UBU7 674 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-220ENST00000522658 SHTN1A0MZ66 631 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 KRBA1A5PL33 1030 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 DDX58O95786 925 aaKnown RBP8.03□□□□□ -1.12
PABPC1-220ENST00000522658 HOXB7P09629 217 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 COL8A1P27658 744 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 FKBP1BP68106 108 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 GPSM2P81274 684 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 TLR1Q15399 786 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 PKN2Q16513 984 aaKnown RBP8.03□□□□□ -1.12
PABPC1-220ENST00000522658 SLFNL1Q499Z3 407 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 EFHC2Q5JST6 749 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 ANGEL2Q5VTE6 544 aaKnown RBP8.03□□□□□ -1.12
PABPC1-220ENST00000522658 RNF135Q8IUD6 432 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 GOLGA6L1Q8N7Z2 621 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 CDCA5Q96FF9 252 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 FAM89AQ96GI7 184 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 ABHD17AQ96GS6 310 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 CHMP4AQ9BY43 222 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 HYPKQ9NX55 129 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 RNF186Q9NXI6 227 aa8.03□□□□□ -1.12
PABPC1-220ENST00000522658 PAPPA2Q9BXP8 1791 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 DUOX1Q9NRD9 1551 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 AKAP11Q9UKA4 1901 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 INHAP05111 366 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 FGFR3P22607 806 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 TMPOP42166 694 aaKnown RBP8.02□□□□□ -1.13
PABPC1-220ENST00000522658 RPS8P62241 208 aaKnown RBP8.02□□□□□ -1.13
PABPC1-220ENST00000522658 CTBSQ01459 385 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 SREBF2Q12772 1141 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 SF3B3Q15393 1217 aaKnown RBP8.02□□□□□ -1.13
PABPC1-220ENST00000522658 LINC00114Q6XXX2 140 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 RASAL3Q86YV0 1011 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 ANKRD18AQ8IVF6 992 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 AGBL3Q8NEM8 1001 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 CELF1Q92879 486 aaKnown RBP8.02□□□□□ -1.13
PABPC1-220ENST00000522658 GCC1Q96CN9 775 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 ZIC5Q96T25 663 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 CDC5LQ99459 802 aaKnown RBP8.02□□□□□ -1.13
PABPC1-220ENST00000522658 POLLQ9UGP5 575 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 MKL2Q9ULH7 1088 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 XDHP47989 1333 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 PITPNM2Q9BZ72 1349 aa8.02□□□□□ -1.13
PABPC1-220ENST00000522658 RTL9Q8NET4 1388 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 FAM155AB1AL88 458 aaPredicted RBP8.01□□□□□ -1.13
PABPC1-220ENST00000522658 ATP4AP20648 1035 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 CALD1Q05682 793 aaKnown RBP8.01□□□□□ -1.13
PABPC1-220ENST00000522658 VAC14Q08AM6 782 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 OXLD1Q5BKU9 147 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 SLCO4C1Q6ZQN7 724 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms