RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SMARCA5O60264 1052 aaPredicted RBP25.12■■□□□ 1.61
SDCBP-209ENST00000522243 WDR18Q9BV38 432 aa25.12■■□□□ 1.61
SDCBP-209ENST00000522243 ZBTB21Q9ULJ3 1066 aa25.12■■□□□ 1.61
SDCBP-209ENST00000522243 HTTP42858 3142 aa25.11■■□□□ 1.61
SDCBP-209ENST00000522243 MTFR1Q15390 333 aa25.11■■□□□ 1.61
SDCBP-209ENST00000522243 TMED8Q6PL24 325 aaPredicted RBP25.11■■□□□ 1.61
SDCBP-209ENST00000522243 NAV1Q8NEY1 1877 aa25.11■■□□□ 1.61
SDCBP-209ENST00000522243 KIAA0100Q14667 2235 aaKnown RBP25.1■■□□□ 1.61
SDCBP-209ENST00000522243 GRK4P32298 578 aa25.1■■□□□ 1.61
SDCBP-209ENST00000522243 BACE1P56817 501 aa25.1■■□□□ 1.61
SDCBP-209ENST00000522243 SLFNL1Q499Z3 407 aa25.1■■□□□ 1.61
SDCBP-209ENST00000522243 ASCC2Q9H1I8 757 aaPredicted RBP25.1■■□□□ 1.61
SDCBP-209ENST00000522243 PAG1Q9NWQ8 432 aa25.1■■□□□ 1.61
SDCBP-209ENST00000522243 TMOD4Q9NZQ9 345 aa25.1■■□□□ 1.61
SDCBP-209ENST00000522243 TNPO2O14787 897 aaKnown RBP25.09■■□□□ 1.61
SDCBP-209ENST00000522243 GH2P01242 217 aa25.09■■□□□ 1.61
SDCBP-209ENST00000522243 PABPC4Q13310 644 aaKnown RBP eCLIP25.09■■□□□ 1.61
SDCBP-209ENST00000522243 TTC6Q86TZ1 520 aa25.09■■□□□ 1.61
SDCBP-209ENST00000522243 LRRCC1Q9C099 1032 aa25.09■■□□□ 1.61
SDCBP-209ENST00000522243 SERPINB13Q9UIV8 391 aa25.09■■□□□ 1.61
SDCBP-209ENST00000522243 TCRBV5S4A2TA0A5A2 114 aa25.08■■□□□ 1.61
SDCBP-209ENST00000522243 POLR3DP05423 398 aaPredicted RBP25.08■■□□□ 1.61
SDCBP-209ENST00000522243 ATP5JP18859 108 aa25.08■■□□□ 1.61
SDCBP-209ENST00000522243 PLCD1P51178 756 aa25.08■■□□□ 1.61
SDCBP-209ENST00000522243 LCORLQ8N3X6 602 aa25.08■■□□□ 1.61
SDCBP-209ENST00000522243 CRNKL1Q9BZJ0 848 aaKnown RBP25.08■■□□□ 1.61
SDCBP-209ENST00000522243 GINM1Q9NU53 330 aa25.08■■□□□ 1.61
SDCBP-209ENST00000522243 BIN2Q9UBW5 565 aaPredicted RBP25.08■■□□□ 1.61
SDCBP-209ENST00000522243 DDX60LQ5H9U9 1706 aaKnown RBP25.08■■□□□ 1.61
SDCBP-209ENST00000522243 USP17L10C9JJH3 530 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 FLT3LGP49771 235 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 EVX2Q03828 476 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 FAM110CQ1W6H9 321 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 PRPF38BQ5VTL8 546 aaKnown RBP25.07■■□□□ 1.6
SDCBP-209ENST00000522243 TATDN1Q6P1N9 297 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 SDR42E1Q8WUS8 393 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 EHD4Q9H223 541 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 PDE4DIPQ5VU43 2346 aa25.07■■□□□ 1.6
SDCBP-209ENST00000522243 C19orf81C9J6K1 198 aa25.06■■□□□ 1.6
SDCBP-209ENST00000522243 HAUS7Q99871 368 aa25.06■■□□□ 1.6
SDCBP-209ENST00000522243 ARMT1Q9H993 441 aa25.06■■□□□ 1.6
SDCBP-209ENST00000522243 MCM9Q9NXL9 1143 aa25.06■■□□□ 1.6
SDCBP-209ENST00000522243 DOCK3Q8IZD9 2030 aa25.06■■□□□ 1.6
SDCBP-209ENST00000522243 CHGBP05060 677 aa25.05■■□□□ 1.6
SDCBP-209ENST00000522243 ADD2P35612 726 aa25.05■■□□□ 1.6
SDCBP-209ENST00000522243 GCLCP48506 637 aaPredicted RBP25.05■■□□□ 1.6
SDCBP-209ENST00000522243 IRX3P78415 501 aaPredicted RBP25.05■■□□□ 1.6
SDCBP-209ENST00000522243 CERKLQ49MI3 558 aaPredicted RBP25.05■■□□□ 1.6
SDCBP-209ENST00000522243 TAOK2Q9UL54 1235 aa25.05■■□□□ 1.6
SDCBP-209ENST00000522243 MYH7P12883 1935 aa25.04■■□□□ 1.6
SDCBP-209ENST00000522243 ADCY3O60266 1144 aa25.04■■□□□ 1.6
SDCBP-209ENST00000522243 PEX10O60683 326 aa25.04■■□□□ 1.6
SDCBP-209ENST00000522243 SHMT1P34896 483 aa25.04■■□□□ 1.6
SDCBP-209ENST00000522243 RAB3GAP1Q15042 981 aa25.04■■□□□ 1.6
SDCBP-209ENST00000522243 ZYXQ15942 572 aaKnown RBP25.04■■□□□ 1.6
SDCBP-209ENST00000522243 P2RX7Q99572 595 aaKnown RBP25.04■■□□□ 1.6
SDCBP-209ENST00000522243 EMILIN3Q9NT22 766 aa25.04■■□□□ 1.6
SDCBP-209ENST00000522243 PRKAB2O43741 272 aa25.03■■□□□ 1.6
SDCBP-209ENST00000522243 ELNP15502 786 aa25.03■■□□□ 1.6
SDCBP-209ENST00000522243 ABCB5Q2M3G0 1257 aa25.03■■□□□ 1.6
SDCBP-209ENST00000522243 SLAIN1Q8ND83 568 aa25.03■■□□□ 1.6
SDCBP-209ENST00000522243 COA7Q96BR5 231 aa25.03■■□□□ 1.6
SDCBP-209ENST00000522243 FEZ1Q99689 392 aa25.03■■□□□ 1.6
SDCBP-209ENST00000522243 DCP1AQ9NPI6 582 aaPredicted RBP25.03■■□□□ 1.6
SDCBP-209ENST00000522243 MBD4O95243 580 aa25.02■■□□□ 1.6
SDCBP-209ENST00000522243 CYP2D6P10635 497 aa25.02■■□□□ 1.6
SDCBP-209ENST00000522243 CCL5P13501 91 aa25.02■■□□□ 1.6
SDCBP-209ENST00000522243 HOXA7P31268 230 aaPredicted RBP25.02■■□□□ 1.6
SDCBP-209ENST00000522243 UBXN2AP68543 259 aa25.02■■□□□ 1.6
SDCBP-209ENST00000522243 USP17L2Q6R6M4 530 aa25.02■■□□□ 1.6
SDCBP-209ENST00000522243 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.02■■□□□ 1.6
SDCBP-209ENST00000522243 DCTPP1Q9H773 170 aa25.02■■□□□ 1.6
SDCBP-209ENST00000522243 CABP5Q9NP86 173 aa25.02■■□□□ 1.6
SDCBP-209ENST00000522243 GABPAQ06546 454 aa25.01■■□□□ 1.59
SDCBP-209ENST00000522243 RNF208Q9H0X6 261 aa25.01■■□□□ 1.59
SDCBP-209ENST00000522243 BAZ2AQ9UIF9 1905 aaKnown RBP25.01■■□□□ 1.59
SDCBP-209ENST00000522243 CENPFP49454 3210 aa25■■□□□ 1.59
SDCBP-209ENST00000522243 ACER1Q8TDN7 264 aa25■■□□□ 1.59
SDCBP-209ENST00000522243 SHISA4Q96DD7 197 aa25■■□□□ 1.59
SDCBP-209ENST00000522243 GUCY1A2P33402 732 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 HERVK_113P62684 666 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 IRF5Q13568 498 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 TSHZ3Q63HK5 1081 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 UNC93B1Q9H1C4 597 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 TXNRD2Q9NNW7 524 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 ECHDC1Q9NTX5 307 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 MORF4L1Q9UBU8 362 aa24.99■■□□□ 1.59
SDCBP-209ENST00000522243 MPHOSPH10O00566 681 aaKnown RBP24.98■■□□□ 1.59
SDCBP-209ENST00000522243 INHAP05111 366 aa24.98■■□□□ 1.59
SDCBP-209ENST00000522243 SEPT2Q15019 361 aa24.98■■□□□ 1.59
SDCBP-209ENST00000522243 SLC44A5Q8NCS7 719 aa24.98■■□□□ 1.59
SDCBP-209ENST00000522243 PXYLP1Q8TE99 480 aa24.98■■□□□ 1.59
SDCBP-209ENST00000522243 DYNLL2Q96FJ2 89 aa24.98■■□□□ 1.59
SDCBP-209ENST00000522243 PCDHB15Q9Y5E8 787 aa24.98■■□□□ 1.59
SDCBP-209ENST00000522243 MYH8P13535 1937 aa24.97■■□□□ 1.59
SDCBP-209ENST00000522243 UBE3CQ15386 1083 aa24.97■■□□□ 1.59
SDCBP-209ENST00000522243 PAGR1Q9BTK6 254 aa24.97■■□□□ 1.59
SDCBP-209ENST00000522243 RBPJLQ9UBG7 517 aa24.97■■□□□ 1.59
SDCBP-209ENST00000522243 CYP2D7A0A087X1C5 515 aa24.96■■□□□ 1.59
SDCBP-209ENST00000522243 SMIM22K7EJ46 135 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms