RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 UBXN2AP68543 259 aa22.4■■□□□ 1.18
TOP1MT-216ENST00000522121 SLAIN1Q8ND83 568 aa22.4■■□□□ 1.18
TOP1MT-216ENST00000522121 ZBTB21Q9ULJ3 1066 aa22.4■■□□□ 1.18
TOP1MT-216ENST00000522121 MYO5AQ9Y4I1 1855 aaKnown RBP22.4■■□□□ 1.18
TOP1MT-216ENST00000522121 USP17L10C9JJH3 530 aa22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 PDE6AP16499 860 aa22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 JAG1P78504 1218 aa22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 COA7Q96BR5 231 aa22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 ASCC2Q9H1I8 757 aaPredicted RBP22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 EHD4Q9H223 541 aa22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 SERPINB13Q9UIV8 391 aa22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 GABRQQ9UN88 632 aa22.39■■□□□ 1.17
TOP1MT-216ENST00000522121 FOCADQ5VW36 1801 aa22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 ATAD5Q96QE3 1844 aa22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 FLT3LGP49771 235 aa22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 IRX3P78415 501 aaPredicted RBP22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 MTFR1Q15390 333 aa22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 C20orf194Q5TEA3 1177 aa22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 NKX2-3Q8TAU0 364 aa22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 RIOK1Q9BRS2 568 aaKnown RBP22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 CRNKL1Q9BZJ0 848 aaKnown RBP22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 SIPA1L1O43166 1804 aa22.38■■□□□ 1.17
TOP1MT-216ENST00000522121 ADCY3O60266 1144 aa22.37■■□□□ 1.17
TOP1MT-216ENST00000522121 TATDN1Q6P1N9 297 aa22.37■■□□□ 1.17
TOP1MT-216ENST00000522121 CDK5RAP2Q96SN8 1893 aa22.37■■□□□ 1.17
TOP1MT-216ENST00000522121 ZNF532Q9HCE3 1301 aa22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 LOC285556D6RIA3 1793 aa22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 GH2P01242 217 aa22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 POLR3DP05423 398 aaPredicted RBP22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 ATP5JP18859 108 aa22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 HOXA7P31268 230 aaPredicted RBP22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 SHROOM1Q2M3G4 852 aaPredicted RBP22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 PXYLP1Q8TE99 480 aa22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 LRRCC1Q9C099 1032 aa22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 PAG1Q9NWQ8 432 aa22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 KIAA0100Q14667 2235 aaKnown RBP22.36■■□□□ 1.17
TOP1MT-216ENST00000522121 CCL5P13501 91 aa22.35■■□□□ 1.17
TOP1MT-216ENST00000522121 IRF5Q13568 498 aa22.35■■□□□ 1.17
TOP1MT-216ENST00000522121 CERKLQ49MI3 558 aaPredicted RBP22.35■■□□□ 1.17
TOP1MT-216ENST00000522121 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.35■■□□□ 1.171e-6■■□□□ 13.3
TOP1MT-216ENST00000522121 RNF208Q9H0X6 261 aa22.35■■□□□ 1.17
TOP1MT-216ENST00000522121 BOLA2Q9H3K6 86 aa22.35■■□□□ 1.17
TOP1MT-216ENST00000522121 USP17L2Q6R6M4 530 aa22.34■■□□□ 1.17
TOP1MT-216ENST00000522121 CABP5Q9NP86 173 aa22.34■■□□□ 1.17
TOP1MT-216ENST00000522121 TAOK2Q9UL54 1235 aa22.34■■□□□ 1.17
TOP1MT-216ENST00000522121 TCRBV5S4A2TA0A5A2 114 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 SLC34A2O95436 690 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 GJB1P08034 283 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 PLCD1P51178 756 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 RAB3GAP1Q15042 981 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 ABCB5Q2M3G0 1257 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 GCC1Q96CN9 775 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 EDC3Q96F86 508 aaKnown RBP22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 P2RX7Q99572 595 aaKnown RBP22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 FEZ1Q99689 392 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 MCM9Q9NXL9 1143 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 MORF4L1Q9UBU8 362 aa22.33■■□□□ 1.17
TOP1MT-216ENST00000522121 MGAMO43451 1857 aa22.32■■□□□ 1.16
TOP1MT-216ENST00000522121 ELNP15502 786 aa22.32■■□□□ 1.16
TOP1MT-216ENST00000522121 GJA8P48165 433 aa22.32■■□□□ 1.16
TOP1MT-216ENST00000522121 HERVK_113P62684 666 aa22.32■■□□□ 1.16
TOP1MT-216ENST00000522121 HAUS7Q99871 368 aa22.32■■□□□ 1.16
TOP1MT-216ENST00000522121 MYH1P12882 1939 aa22.31■■□□□ 1.16
TOP1MT-216ENST00000522121 USP14P54578 494 aa22.31■■□□□ 1.16
TOP1MT-216ENST00000522121 LCORLQ8N3X6 602 aa22.31■■□□□ 1.16
TOP1MT-216ENST00000522121 GTF3C2Q8WUA4 911 aaPredicted RBP22.31■■□□□ 1.16
TOP1MT-216ENST00000522121 EMILIN3Q9NT22 766 aa22.31■■□□□ 1.16
TOP1MT-216ENST00000522121 INHAP05111 366 aa22.3■■□□□ 1.16
TOP1MT-216ENST00000522121 SHMT1P34896 483 aa22.3■■□□□ 1.16
TOP1MT-216ENST00000522121 ADD2P35612 726 aa22.3■■□□□ 1.16
TOP1MT-216ENST00000522121 GPRC5AQ8NFJ5 357 aa22.3■■□□□ 1.16
TOP1MT-216ENST00000522121 SDR42E1Q8WUS8 393 aa22.3■■□□□ 1.16
TOP1MT-216ENST00000522121 UNC93B1Q9H1C4 597 aa22.3■■□□□ 1.16
TOP1MT-216ENST00000522121 DCP1AQ9NPI6 582 aaPredicted RBP22.3■■□□□ 1.16
TOP1MT-216ENST00000522121 ZYXQ15942 572 aaKnown RBP22.29■■□□□ 1.16
TOP1MT-216ENST00000522121 ZSCAN25Q6NSZ9 544 aa22.29■■□□□ 1.16
TOP1MT-216ENST00000522121 SHISA4Q96DD7 197 aa22.29■■□□□ 1.16
TOP1MT-216ENST00000522121 C12orf42Q96LP6 360 aa22.29■■□□□ 1.16
TOP1MT-216ENST00000522121 KIAA1683Q9H0B3 1180 aa22.29■■□□□ 1.16
TOP1MT-216ENST00000522121 ARMT1Q9H993 441 aa22.29■■□□□ 1.16
TOP1MT-216ENST00000522121 SMARCA5O60264 1052 aaPredicted RBP22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 MBD4O95243 580 aa22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 GABPAQ06546 454 aa22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 CCAR1Q8IX12 1150 aaKnown RBP22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 U2AF1L4Q8WU68 220 aaKnown RBP22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 ATP8A2Q9NTI2 1148 aa22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 BRCA2P51587 3418 aa22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 MKI67P46013 3256 aaKnown RBP22.28■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L15C9J2P7 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L13C9JLJ4 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L11C9JVI0 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L18D6R9N7 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L22D6RA61 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L17D6RBQ6 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L19D6RCP7 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L20D6RJB6 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 MPHOSPH10O00566 681 aaKnown RBP22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 CAPN2P17655 700 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 USP17L24Q0WX57 530 aa22.27■■□□□ 1.16
TOP1MT-216ENST00000522121 UBE3CQ15386 1083 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms