RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
SHPRH-209ENST00000521977 SH2B2O14492 632 aaPredicted RBP11.23□□□□□ -0.61
SHPRH-209ENST00000521977 RPS12P25398 132 aaKnown RBP11.23□□□□□ -0.61
SHPRH-209ENST00000521977 CFAP100Q494V2 611 aa11.23□□□□□ -0.61
SHPRH-209ENST00000521977 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
SHPRH-209ENST00000521977 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
SHPRH-209ENST00000521977 BRF1Q92994 677 aa11.23□□□□□ -0.61
SHPRH-209ENST00000521977 ZNF274Q96GC6 653 aaPredicted RBP11.23□□□□□ -0.61
SHPRH-209ENST00000521977 TMEM87BQ96K49 555 aa11.23□□□□□ -0.61
SHPRH-209ENST00000521977 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
SHPRH-209ENST00000521977 CWC22Q9HCG8 908 aaKnown RBP11.23□□□□□ -0.61
SHPRH-209ENST00000521977 KDM4AO75164 1064 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 SBF1O95248 1867 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
SHPRH-209ENST00000521977 SLC3A2P08195 630 aaKnown RBP11.22□□□□□ -0.61
SHPRH-209ENST00000521977 LIFRP42702 1097 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 PLCD1P51178 756 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 C16orf86Q6ZW13 317 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 AMOTL1Q8IY63 956 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 ESR2Q92731 530 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
SHPRH-209ENST00000521977 OSBPL5Q9H0X9 879 aaPredicted RBP11.22□□□□□ -0.61
SHPRH-209ENST00000521977 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
SHPRH-209ENST00000521977 HDAC9Q9UKV0 1011 aa11.22□□□□□ -0.61
SHPRH-209ENST00000521977 COL2A1P02458 1487 aaPredicted RBP11.21□□□□□ -0.61
SHPRH-209ENST00000521977 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 PFKFB2O60825 505 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.61
SHPRH-209ENST00000521977 LMNB1P20700 586 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.61
SHPRH-209ENST00000521977 GABPAQ06546 454 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 PDE4BQ07343 736 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 APOBRQ0VD83 1088 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 NFIAQ12857 509 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 SGMS1Q86VZ5 419 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 DPF2Q92785 391 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 GTF3C6Q969F1 213 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 LY9Q9HBG7 655 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
SHPRH-209ENST00000521977 CHMP5Q9NZZ3 219 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
SHPRH-209ENST00000521977 SAP30BPQ9UHR5 308 aaKnown RBP11.21□□□□□ -0.61
SHPRH-209ENST00000521977 ANGEL1Q9UNK9 670 aaKnown RBP11.21□□□□□ -0.61
SHPRH-209ENST00000521977 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.61
SHPRH-209ENST00000521977 NID2Q14112 1375 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 YBX3P16989 372 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHPRH-209ENST00000521977 PDIA3P30101 505 aaKnown RBP11.2□□□□□ -0.62
SHPRH-209ENST00000521977 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
SHPRH-209ENST00000521977 EIF6P56537 245 aaKnown RBP11.2□□□□□ -0.62
SHPRH-209ENST00000521977 FGD1P98174 961 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 SEC23AQ15436 765 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 TTC6Q86TZ1 520 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 OGFOD1Q8N543 542 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 DYNLL2Q96FJ2 89 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
SHPRH-209ENST00000521977 TDRD3Q9H7E2 651 aaKnown RBP11.2□□□□□ -0.62
SHPRH-209ENST00000521977 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
SHPRH-209ENST00000521977 ZNF541Q9H0D2 1346 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
SHPRH-209ENST00000521977 ENTPD3O75355 529 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 PRDM1O75626 825 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 CDK8P49336 464 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 SCRN1Q12765 414 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 PICALMQ13492 652 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 SART3Q15020 963 aaKnown RBP11.19□□□□□ -0.62
SHPRH-209ENST00000521977 DLGAP5Q15398 846 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 TMEM67Q5HYA8 995 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 RRP12Q5JTH9 1297 aaKnown RBP11.19□□□□□ -0.62
SHPRH-209ENST00000521977 STK11IPQ8N1F8 1099 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 EHD4Q9H223 541 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 DHX36Q9H2U1 1008 aaKnown RBP11.19□□□□□ -0.62
SHPRH-209ENST00000521977 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 TCP11L1Q9NUJ3 509 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 SIPA1L1O43166 1804 aa11.19□□□□□ -0.62
SHPRH-209ENST00000521977 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 TNKSO95271 1327 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 KLF18A0A0U1RQI7 1052 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 RANBP6O60518 1105 aaKnown RBP11.18□□□□□ -0.62
SHPRH-209ENST00000521977 RASA1P20936 1047 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 RCAN1P53805 252 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 STK3Q13188 491 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 WTAPQ15007 396 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 SLC4A8Q2Y0W8 1093 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 FKBP1CQ5VVH2 108 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 APOA5Q6Q788 366 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 SH3BP5LQ7L8J4 393 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
SHPRH-209ENST00000521977 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 ZSCAN10Q96SZ4 725 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms