RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 NEXNQ0ZGT2 675 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 CHAF1AQ13111 956 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 CDC42EP5Q6NZY7 148 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 HHIPL2Q6UWX4 724 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 SCYL3Q8IZE3 742 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 ADAMTS19Q8TE59 1207 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 TMOD2Q9NZR1 351 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 AK9Q5TCS8 1911 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
TRAPPC9-212ENST00000521944 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 TK2O00142 265 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 PSEN2P49810 448 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 MAP3K10Q02779 954 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 LDHAL6AQ6ZMR3 332 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 SENP6Q9GZR1 1112 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 MAST2Q6P0Q8 1798 aa11.31□□□□□ -0.6
TRAPPC9-212ENST00000521944 CACNA1AO00555 2505 aa11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 SEMA3EO15041 775 aa11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 CCL14Q16627 93 aa11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 ATXN2LQ8WWM7 1075 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 USP6NLQ92738 828 aa11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 BADQ92934 168 aa11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 UHRF1Q96T88 793 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC9-212ENST00000521944 XRCC5P13010 732 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-212ENST00000521944 EPHB4P54760 987 aa11.29□□□□□ -0.6
TRAPPC9-212ENST00000521944 TBC1D22AQ8WUA7 517 aa11.29□□□□□ -0.6
TRAPPC9-212ENST00000521944 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
TRAPPC9-212ENST00000521944 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
TRAPPC9-212ENST00000521944 IFT57Q9NWB7 429 aa11.29□□□□□ -0.6
TRAPPC9-212ENST00000521944 ITGB8P26012 769 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 MLLT3P42568 568 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 RTP1P59025 263 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 SH3RF1Q7Z6J0 888 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 LINS1Q8NG48 757 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 SNX27Q96L92 541 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 LRFN3Q9BTN0 628 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 TXNRD2Q9NNW7 524 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 PICK1Q9NRD5 415 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 CNNM1Q9NRU3 951 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 CHMP3Q9Y3E7 222 aa11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 TCF20Q9UGU0 1960 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-212ENST00000521944 TRIM43BA6NCK2 446 aa11.27□□□□□ -0.61
TRAPPC9-212ENST00000521944 GCLCP48506 637 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-212ENST00000521944 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.61
TRAPPC9-212ENST00000521944 TRIM43Q96BQ3 446 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-212ENST00000521944 EPHX3Q9H6B9 360 aa11.27□□□□□ -0.61
TRAPPC9-212ENST00000521944 MORF4L1Q9UBU8 362 aa11.27□□□□□ -0.61
TRAPPC9-212ENST00000521944 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.61
TRAPPC9-212ENST00000521944 CTNND1O60716 968 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 PDE3AQ14432 1141 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 VGLL2Q8N8G2 317 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 DNAAF4Q8WXU2 420 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 PPM1EQ8WY54 764 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 C1QTNF1Q9BXJ1 281 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 ZNF576Q9H609 170 aa11.26□□□□□ -0.61
TRAPPC9-212ENST00000521944 RLFQ13129 1914 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 BMP1P13497 986 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 GNAI1P63096 354 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 MRPS5P82675 430 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 ADGRE1Q14246 886 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 CCDC57Q2TAC2 916 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 Q3C1V9 767 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 MORN1Q5T089 497 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 ALYREFQ86V81 257 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 KAZALD1Q96I82 304 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 MYH16Q9H6N6 1097 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 PDLIM7Q9NR12 457 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 USP40Q9NVE5 1235 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 FLRT1Q9NZU1 646 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 THEGQ9P2T0 379 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 FRMPD3Q5JV73 1810 aa11.25□□□□□ -0.61
TRAPPC9-212ENST00000521944 WDFY4Q6ZS81 3184 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 IGHA2P01877 340 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 ZKSCAN1P17029 563 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 DNAJB2P25686 324 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 RGS3P49796 1198 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 HMGCS2P54868 508 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 FLIIQ13045 1269 aa11.24□□□□□ -0.61
TRAPPC9-212ENST00000521944 SPP2Q13103 211 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms