RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CST3P01034 146 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-209ENST00000521559 PGRP06401 933 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 JUNBP17275 347 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-209ENST00000521559 CLCN7P51798 805 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 BNIP3Q12983 259 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 SFRP5Q5T4F7 317 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 TMCO4Q5TGY1 634 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 SLC6A19Q695T7 634 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 NFXL1Q6ZNB6 911 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 UBE3DQ7Z6J8 389 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 ASIC4Q96FT7 647 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 MIPEPQ99797 713 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 TNKS2Q9H2K2 1166 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 FBRSQ9HAH7 460 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 ADAM30Q9UKF2 790 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 TLR6Q9Y2C9 796 aa5.46□□□□□ -1.54
VPS13B-209ENST00000521559 SMARCA4P51532 1647 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 FAM155AB1AL88 458 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-209ENST00000521559 SLITRK5O94991 958 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 GBP2P32456 591 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-209ENST00000521559 ANGEL2Q5VTE6 544 aaKnown RBP5.45□□□□□ -1.54
VPS13B-209ENST00000521559 LETMD1Q6P1Q0 360 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 C22orf34Q6ZV56 151 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 CBLL1Q75N03 491 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 SPRED2Q7Z698 418 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 MRPL41Q8IXM3 137 aaKnown RBP5.45□□□□□ -1.54
VPS13B-209ENST00000521559 PI4K2BQ8TCG2 481 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 TMEM74Q96NL1 305 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 PLAGL2Q9UPG8 496 aa5.45□□□□□ -1.54
VPS13B-209ENST00000521559 CD8BP10966 210 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 FUT4P22083 530 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 CDK8P49336 464 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 TAGLNQ01995 201 aaKnown RBP5.44□□□□□ -1.54
VPS13B-209ENST00000521559 CAMK2GQ13555 558 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-209ENST00000521559 NKG7Q16617 165 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 ZNF792Q3KQV3 632 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 PRAMEF13Q5VWM6 474 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 ZNF574Q6ZN55 896 aaPredicted RBP5.44□□□□□ -1.54
VPS13B-209ENST00000521559 MCATQ8IVS2 390 aaKnown RBP5.44□□□□□ -1.54
VPS13B-209ENST00000521559 GIPC2Q8TF65 315 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 GATAD2BQ8WXI9 593 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 RNF114Q9Y508 228 aa5.44□□□□□ -1.54
VPS13B-209ENST00000521559 SMARCA2P51531 1590 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 CILPO75339 1184 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 PF4P02776 101 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 ZNF865P0CJ78 1059 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-209ENST00000521559 PLCG1P19174 1290 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 ETV3P41162 512 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 KIR3DL1P43629 444 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 YARSP54577 528 aaKnown RBP5.43□□□□□ -1.54
VPS13B-209ENST00000521559 NKPD1Q17RQ9 610 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 SNAP47Q5SQN1 464 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 SPACA3Q8IXA5 215 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 MFSD4AQ8N468 514 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 TMEM87BQ96K49 555 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 FMNL2Q96PY5 1086 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 TJP2Q9UDY2 1190 aa5.43□□□□□ -1.54
VPS13B-209ENST00000521559 IKZF1Q13422 519 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 MLECQ14165 292 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 SLC23A3Q6PIS1 610 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 BNC2Q6ZN30 1099 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-209ENST00000521559 XAGE3Q8WTP9 111 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 RHOVQ96L33 236 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 LMCD1Q9NZU5 365 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 U3KQE9 123 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 PEG3Q9GZU2 1588 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 ROBO2Q9HCK4 1378 aa5.42□□□□□ -1.54
VPS13B-209ENST00000521559 FAM221AA4D161 298 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 MINDY4BA8MYZ0 360 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 ITGB5P18084 799 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 MPP2Q14168 576 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 TMEM201Q5SNT2 666 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 THAP5Q7Z6K1 395 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 ATG4DQ86TL0 474 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-209ENST00000521559 WFDC3Q8IUB2 231 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 CCDC120Q96HB5 630 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 RC3H2Q9HBD1 1191 aaKnown RBP5.41□□□□□ -1.54
VPS13B-209ENST00000521559 PITPNM2Q9BZ72 1349 aa5.41□□□□□ -1.54
VPS13B-209ENST00000521559 BAZ1BQ9UIG0 1483 aaKnown RBP5.4□□□□□ -1.54
VPS13B-209ENST00000521559 CBX7O95931 251 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 F13A1P00488 732 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 ZP2Q05996 745 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 CWF19L2Q2TBE0 894 aaKnown RBP5.4□□□□□ -1.54
VPS13B-209ENST00000521559 HS2ST1Q7LGA3 356 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 CDH24Q86UP0 819 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 GOLM1Q8NBJ4 401 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 FAM13CQ8NE31 585 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 RIN3Q8TB24 985 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 PIWIL2Q8TC59 973 aaKnown RBP5.4□□□□□ -1.54
VPS13B-209ENST00000521559 CYB5D2Q8WUJ1 264 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 ACSF2Q96CM8 615 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-209ENST00000521559 HSPA12BQ96MM6 686 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 CEP131Q9UPN4 1083 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 CAPN6Q9Y6Q1 641 aa5.4□□□□□ -1.54
VPS13B-209ENST00000521559 F6X3S4 739 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 RNASE1P07998 156 aaKnown RBP5.39□□□□□ -1.55
VPS13B-209ENST00000521559 CD96P40200 585 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
VPS13B-209ENST00000521559 FAM160A1Q05DH4 1040 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms