RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
TRIM35-204ENST00000521283 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
TRIM35-204ENST00000521283 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 ZNF384Q8TF68 577 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 IL1RAPL2Q9NP60 686 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 PICK1Q9NRD5 415 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 GINM1Q9NU53 330 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 PI4KBQ9UBF8 816 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 FZD1Q9UP38 647 aa12.38□□□□□ -0.43
TRIM35-204ENST00000521283 CXCL11O14625 94 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
TRIM35-204ENST00000521283 ATP5JP18859 108 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 PICALMQ13492 652 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 ZSCAN25Q6NSZ9 544 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 MIGA2Q7L4E1 593 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
TRIM35-204ENST00000521283 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRIM35-204ENST00000521283 OSBPL5Q9H0X9 879 aaPredicted RBP12.37□□□□□ -0.43
TRIM35-204ENST00000521283 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
TRIM35-204ENST00000521283 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 SNCAIPQ9Y6H5 919 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
TRIM35-204ENST00000521283 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
TRIM35-204ENST00000521283 GPR25O00155 361 aa12.36□□□□□ -0.43
TRIM35-204ENST00000521283 FKTNO75072 461 aa12.36□□□□□ -0.43
TRIM35-204ENST00000521283 CYP7A1P22680 504 aa12.36□□□□□ -0.43
TRIM35-204ENST00000521283 LRRFIP1Q32MZ4 808 aaKnown RBP12.36□□□□□ -0.43
TRIM35-204ENST00000521283 CTU1Q7Z7A3 348 aaKnown RBP12.36□□□□□ -0.43
TRIM35-204ENST00000521283 SCYL3Q8IZE3 742 aa12.36□□□□□ -0.43
TRIM35-204ENST00000521283 ZKSCAN4Q969J2 545 aaPredicted RBP12.36□□□□□ -0.43
TRIM35-204ENST00000521283 ZFYVE28Q9HCC9 887 aa12.36□□□□□ -0.43
TRIM35-204ENST00000521283 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRIM35-204ENST00000521283 HCSTQ9UBK5 93 aa12.36□□□□□ -0.43
TRIM35-204ENST00000521283 CCL15-CCL14A0A0B4J2E2 113 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 PHF20L1A8MW92 1017 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 APBB1O00213 710 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 HLA-DOAP06340 250 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 CCL15Q16663 113 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 FASTKD5Q7L8L6 764 aaKnown RBP12.35□□□□□ -0.43
TRIM35-204ENST00000521283 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
TRIM35-204ENST00000521283 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
TRIM35-204ENST00000521283 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIM35-204ENST00000521283 PIH1D3Q9NQM4 214 aaKnown RBP12.35□□□□□ -0.43
TRIM35-204ENST00000521283 KCNH4Q9UQ05 1017 aa12.35□□□□□ -0.43
TRIM35-204ENST00000521283 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 DDTLA6NHG4 134 aaPredicted RBP12.34□□□□□ -0.43
TRIM35-204ENST00000521283 IGF2BP3O00425 579 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIM35-204ENST00000521283 IRF6O14896 467 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 COL9A1P20849 921 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 INPP5BP32019 993 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 GJA5P36382 358 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 DGKZQ13574 1117 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 METTL16Q86W50 562 aaKnown RBP12.34□□□□□ -0.43
TRIM35-204ENST00000521283 ZFPM1Q8IX07 1006 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 MAGEB6Q8N7X4 407 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 SH3RF3Q8TEJ3 882 aaPredicted RBP12.34□□□□□ -0.43
TRIM35-204ENST00000521283 ZNF296Q8WUU4 475 aaPredicted RBP12.34□□□□□ -0.43
TRIM35-204ENST00000521283 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 HAUS7Q99871 368 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 DDX4Q9NQI0 724 aaKnown RBP12.34□□□□□ -0.43
TRIM35-204ENST00000521283 PAG1Q9NWQ8 432 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
TRIM35-204ENST00000521283 ERC2O15083 957 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 USP5P45974 858 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
TRIM35-204ENST00000521283 ANKRD23Q86SG2 305 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 TGFBRAP1Q8WUH2 860 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 BRI3BPQ8WY22 251 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 ABHD8Q96I13 439 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 CRNKL1Q9BZJ0 848 aaKnown RBP12.33□□□□□ -0.44
TRIM35-204ENST00000521283 AS3MTQ9HBK9 375 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 SLC45A1Q9Y2W3 748 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 FLT1P17948 1338 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 MYH1P12882 1939 aa12.33□□□□□ -0.44
TRIM35-204ENST00000521283 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 GOLIM4O00461 696 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 GNRH1P01148 92 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 ASNSP08243 561 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 PTPRAP18433 802 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 CAP2P40123 477 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
TRIM35-204ENST00000521283 UBE3CQ15386 1083 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
TRIM35-204ENST00000521283 DDRGK1Q96HY6 314 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 DNAJC2Q99543 621 aaKnown RBP12.32□□□□□ -0.44
TRIM35-204ENST00000521283 PTPN18Q99952 460 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 MCOLN1Q9GZU1 580 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms