RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 PLIN2Q99541 437 aa11.38□□□□□ -0.59
PDGFRB-207ENST00000520579 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
PDGFRB-207ENST00000520579 MTMR7Q9Y216 660 aa11.38□□□□□ -0.59
PDGFRB-207ENST00000520579 MYO3AQ8NEV4 1616 aa11.38□□□□□ -0.59
PDGFRB-207ENST00000520579 MAP2K7O14733 419 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 RANBP1P43487 201 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 EIF4A1P60842 406 aaKnown RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 EZH2Q15910 746 aaKnown RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 TTC39AQ5SRH9 613 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 C1QTNF12Q5T7M4 302 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 KRT40Q6A162 431 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 TMEM139Q8IV31 216 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 RRP36Q96EU6 259 aaKnown RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 MMS19Q96T76 1030 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 KIF9Q9HAQ2 790 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 SENP2Q9HC62 589 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 EHD2Q9NZN4 543 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 ODF2LQ9ULJ1 636 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 GOLGA6L9A6NEM1 432 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 STX10O60499 249 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 CCNHP51946 323 aaPredicted RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 RWDD2BP57060 319 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 ANKRD13CQ8N6S4 541 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 CHP1Q99653 195 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 UBXN6Q9BZV1 441 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 MYO6Q9UM54 1294 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 FPGT-TNNI3KV9GXZ4 949 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 GOLGA6BA6NDN3 693 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 HGSO14964 777 aaPredicted RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 GIGYF1O75420 1035 aaPredicted RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 ALDH1L1O75891 902 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 IFIT1P09914 478 aaKnown RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 HSPD1P10809 573 aaKnown RBP11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 TRAF1Q13077 416 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 IFT81Q8WYA0 676 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 GBP3Q9H0R5 595 aa11.37□□□□□ -0.59
PDGFRB-207ENST00000520579 CMA1P23946 247 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 MYLK4Q86YV6 388 aaPredicted RBP11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 DBF4Q9UBU7 674 aaPredicted RBP11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 BTBD18B2RXH4 712 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 CDC25CP30307 473 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 KRT9P35527 623 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 KIF23Q02241 960 aaPredicted RBP11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 CYP27A1Q02318 531 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 APBA1Q02410 837 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 ADCY2Q08462 1091 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 FILIP1LQ4L180 1135 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 KAZALD1Q96I82 304 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 CTNND2Q9UQB3 1225 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 AATKQ6ZMQ8 1374 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 A0A1B0GUA9 196 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 CAPN15O75808 1086 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 CCDC122Q5T0U0 273 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 KSR2Q6VAB6 950 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 SMCR8Q8TEV9 937 aaPredicted RBP11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 C19orf44Q9H6X5 657 aa11.36□□□□□ -0.59
PDGFRB-207ENST00000520579 A0A087WZG4 1122 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 ZNF609O15014 1411 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 PPP1R12BO60237 982 aaPredicted RBP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 GUCY2FP51841 1108 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 IFT88Q13099 833 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 POSTNQ15063 836 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 CAPS2Q9BXY5 557 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 PAG1Q9NWQ8 432 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 ABCA9Q8IUA7 1624 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 MROH1Q8NDA8 1641 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 ESYT3A0FGR9 886 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 M0R2C6 588 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 ATP1A1P05023 1023 aaKnown RBP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 METAP2P50579 478 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 SEC24CP53992 1094 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 C1orf141Q5JVX7 400 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 CADPS2Q86UW7 1296 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 CCDC26Q8TAB7 109 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 PPANQ9NQ55 473 aaKnown RBP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 A0A1W2PQ27 194 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 A0A1W2PQ64 194 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 A0A1W2PQD8 194 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 MYBL1P10243 752 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 EIF5P55010 431 aaKnown RBP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 NR5A1Q13285 461 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 PARD3BQ8TEW8 1205 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 TBC1D31Q96DN5 1066 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 FAXDC2Q96IV6 333 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 ZNF232Q9UNY5 417 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 B4E1Z4 1266 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 IKBKBO14920 756 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 IRAK1P51617 712 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 INF2Q27J81 1249 aa11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 TSR1Q2NL82 804 aaKnown RBP11.35□□□□□ -0.59
PDGFRB-207ENST00000520579 KCNB2Q92953 911 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms