RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 TNKSO95271 1327 aa10.53□□□□□ -0.72
CSMD1-208ENST00000520561 HSP90AA1P07900 732 aaKnown RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 SHMT1P34896 483 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 HIRAP54198 1017 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 TFAP4Q01664 338 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 TOB2Q14106 344 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 FAM47AQ5JRC9 791 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 NFXL1Q6ZNB6 911 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 SULF1Q8IWU6 871 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 FBXL16Q8N461 479 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 TMX3Q96JJ7 454 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 CCDC17Q96LX7 622 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 ZSCAN10Q96SZ4 725 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 ZKSCAN3Q9BRR0 538 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 AGXT2Q9BYV1 514 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 DEFB129Q9H1M3 183 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 TAF1DQ9H5J8 278 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
CSMD1-208ENST00000520561 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 NAP1L2Q9ULW6 460 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-208ENST00000520561 KLF18A0A0U1RQI7 1052 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 CCDC69A6NI79 296 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 FAM196BA6NMK8 535 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 LIFRP42702 1097 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 APOBRQ0VD83 1088 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 IFIT1BQ5T764 474 aaKnown RBP10.51□□□□□ -0.73
CSMD1-208ENST00000520561 DCAF15Q66K64 600 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 SYNE3Q6ZMZ3 975 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 METTL16Q86W50 562 aaKnown RBP10.51□□□□□ -0.73
CSMD1-208ENST00000520561 TMTC2Q8N394 836 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 NEDD1Q8NHV4 660 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
CSMD1-208ENST00000520561 LY9Q9HBG7 655 aa10.51□□□□□ -0.73
CSMD1-208ENST00000520561 GOLGA8BA8MQT2 603 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 MPHOSPH10O00566 681 aaKnown RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 TBC1D12O60347 775 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 AKR1B1P15121 316 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 CERKLQ49MI3 558 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 TATDN1Q6P1N9 297 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 CDAN1Q8IWY9 1227 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 ENAHQ8N8S7 591 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 NKX2-3Q8TAU0 364 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 TEPSINQ96N21 525 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 SLKQ9H2G2 1235 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 CABP5Q9NP86 173 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 TCP11L1Q9NUJ3 509 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 TPCN1Q9ULQ1 816 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 SCAF8Q9UPN6 1271 aaKnown RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 SLC12A7Q9Y666 1083 aa10.5□□□□□ -0.73
CSMD1-208ENST00000520561 GOLGB1Q14789 3259 aaKnown RBP10.5□□□□□ -0.73
CSMD1-208ENST00000520561 GREB1LQ9C091 1923 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-208ENST00000520561 ZBTB43O43298 467 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 LARGE1O95461 756 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 VEGFAP15692 232 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-208ENST00000520561 SEC23AQ15436 765 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 ABCB5Q2M3G0 1257 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 SUPT20HL1Q3ZLR7 823 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 APOA5Q6Q788 366 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 TMEM179Q6ZVK1 233 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 KRT26Q7Z3Y9 468 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 CATIPQ7Z7H3 387 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 SGMS1Q86VZ5 419 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 MICU3Q86XE3 530 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 DGKHQ86XP1 1220 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 IGDCC4Q8TDY8 1250 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 ZNF274Q96GC6 653 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-208ENST00000520561 ZNF341Q9BYN7 854 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 KAT14Q9H8E8 782 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 PGAP2Q9UHJ9 254 aa10.49□□□□□ -0.73
CSMD1-208ENST00000520561 GOLGA8AA7E2F4 631 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 POTECB2RU33 542 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 ADM5C9JUS6 153 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 NMT2O60551 498 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 DDAH1O94760 285 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 GDF11O95390 407 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 CALM1P0DP23 149 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 CALM2P0DP24 149 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 CALM3P0DP25 149 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 NF2P35240 595 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 METAP2P50579 478 aaKnown RBP eCLIP10.48□□□□□ -0.73
CSMD1-208ENST00000520561 RCAN1P53805 252 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 EVCP57679 992 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 STK3Q13188 491 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 ME3Q16798 604 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 NBPF12Q5TAG4 269 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-208ENST00000520561 MIGA2Q7L4E1 593 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 CCDC83Q8IWF9 413 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 ZNF654Q8IZM8 581 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 CEP95Q96GE4 821 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 STX8Q9UNK0 236 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
CSMD1-208ENST00000520561 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms