RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	TOB2	Q14106	344 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ZRSR1	Q15695	479 aa	Known RBP	10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	RABL6	Q3YEC7	729 aa	Predicted RBP	10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ANO6	Q4KMQ2	910 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	OGFOD1	Q8N543	542 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	FBXO22	Q8NEZ5	403 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CDC5L	Q99459	802 aa	Known RBP	10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	HAUS7	Q99871	368 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	DSCC1	Q9BVC3	393 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	SIL1	Q9H173	461 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	GREM2	Q9H772	168 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	DACT1	Q9NYF0	836 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	FZD1	Q9UP38	647 aa		10.04	□□□□□ -0.8
CTNNA1-223	ENST00000520520	SMTNL1	A8MU46	457 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PFKFB2	O60825	505 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	NF2	P35240	595 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ZNF75D	P51815	510 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	SARM1	Q6SZW1	724 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	FERMT3	Q86UX7	667 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	KIAA0825	Q8IV33	1275 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PDCL2	Q8N4E4	241 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	KBTBD3	Q8NAB2	608 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	RGS22	Q8NE09	1264 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	BRF1	Q92994	677 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	LARP6	Q9BRS8	491 aa	Known RBP	10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	TRIM5	Q9C035	493 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	CBX8	Q9HC52	389 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ANO10	Q9NW15	660 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	MINPP1	Q9UNW1	487 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	HPS5	Q9UPZ3	1129 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PAXBP1	Q9Y5B6	917 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	PSME4	Q14997	1843 aa		10.03	□□□□□ -0.8
CTNNA1-223	ENST00000520520	ZNF609	O15014	1411 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	DHX16	O60231	1041 aa	Known RBP	10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	IGKV5-2	P06315	115 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	LIG1	P18858	919 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	KLRK1	P26718	216 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ZNF165	P49910	485 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	TPRN	Q4KMQ1	711 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520		Q6ZUG5	572 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	DHX32	Q7L7V1	743 aa	Known RBP	10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	UBE3B	Q7Z3V4	1068 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	PODN	Q7Z5L7	613 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	TXNRD3	Q86VQ6	643 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	PLA2G4D	Q86XP0	818 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CEP57L1	Q8IYX8	460 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	SPC24	Q8NBT2	197 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	SMARCC2	Q8TAQ2	1214 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	MRFAP1L1	Q96HT8	127 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	KAZALD1	Q96I82	304 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	GML	Q99445	158 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	TLR7	Q9NYK1	1049 aa	Known RBP	10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CTNNA3	Q9UI47	895 aa		10.02	□□□□□ -0.81
CTNNA1-223	ENST00000520520	BECN2	A8MW95	431 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520		F8W031	263 aa	Predicted RBP	10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	WNT10B	O00744	389 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	IGHMBP2	P38935	993 aa	Known RBP	10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	IL15	P40933	162 aa	Predicted RBP	10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	GSDMD	P57764	484 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	FKBP1B	P68106	108 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	STK3	Q13188	491 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	DACT2	Q5SW24	774 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	TTLL11	Q8NHH1	800 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	DNAJC2	Q99543	621 aa	Known RBP	10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ZMYND15	Q9H091	742 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CLIP2	Q9UDT6	1046 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	DBNL	Q9UJU6	430 aa	Known RBP	10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ANGEL1	Q9UNK9	670 aa	Known RBP	10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	JAG2	Q9Y219	1238 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	PITPNM2	Q9BZ72	1349 aa		10.01	□□□□□ -0.81
CTNNA1-223	ENST00000520520	MYH3	P11055	1940 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	TUBB4A	P04350	444 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ZFY	P08048	801 aa	Predicted RBP	10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	PTGS1	P23219	599 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	GTF2I	P78347	998 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	PTPN12	Q05209	780 aa	Known RBP	10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	FAM160A1	Q05DH4	1040 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	TFCP2	Q12800	502 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CAMK4	Q16566	473 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	TTLL5	Q6EMB2	1281 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ARMC9	Q7Z3E5	817 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ZNF589	Q86UQ0	364 aa	Predicted RBP	10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	LUZP1	Q86V48	1076 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ZNF274	Q96GC6	653 aa	Predicted RBP	10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	MS4A4A	Q96JQ5	239 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	ZNF830	Q96NB3	372 aa	Predicted RBP	10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	MPHOSPH8	Q99549	860 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	KCNF1	Q9H3M0	494 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	R3HDML	Q9H3Y0	253 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	BSDC1	Q9NW68	430 aa	Predicted RBP	10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CGN	Q9P2M7	1197 aa	Known RBP	10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CHMP3	Q9Y3E7	222 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	LAMA4	Q16363	1823 aa		10	□□□□□ -0.81
CTNNA1-223	ENST00000520520	PTPDC1	A2A3K4	754 aa		9.99	□□□□□ -0.81
CTNNA1-223	ENST00000520520	GPR25	O00155	361 aa		9.99	□□□□□ -0.81
CTNNA1-223	ENST00000520520	SNAP23	O00161	211 aa		9.99	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CCP110	O43303	1012 aa		9.99	□□□□□ -0.81
CTNNA1-223	ENST00000520520	CIAO1	O76071	339 aa		9.99	□□□□□ -0.81

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