RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 RGS19P49795 217 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 PLCD1P51178 756 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 HMGCS2P54868 508 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 JAG1P78504 1218 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 CAP1Q01518 475 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 PABPC4Q13310 644 aaKnown RBP eCLIP17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 SLFNL1Q499Z3 407 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 TSHZ3Q63HK5 1081 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 KBTBD3Q8NAB2 608 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 SMCR8Q8TEV9 937 aaPredicted RBP17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 SDR42E1Q8WUS8 393 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 ATP8A2Q9NTI2 1148 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 TAOK2Q9UL54 1235 aa17.32■□□□□ 0.36
R3HCC1-206ENST00000520480 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 BACE1P56817 501 aa17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 CERKLQ49MI3 558 aaPredicted RBP17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 SH3D19Q5HYK7 790 aa17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 TREML2Q5T2D2 321 aa17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 TMOD4Q9NZQ9 345 aa17.31■□□□□ 0.36
R3HCC1-206ENST00000520480 C19orf81C9J6K1 198 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 GH2P01242 217 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 ZFYP08048 801 aaPredicted RBP17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 BCRP11274 1271 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 MX1P20591 662 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 PRMT2P55345 433 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 SOX10P56693 466 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 MTMR2Q13614 643 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 ABCB5Q2M3G0 1257 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 AMOTL1Q8IY63 956 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 ARHGAP39Q9C0H5 1083 aa17.3■□□□□ 0.36
R3HCC1-206ENST00000520480 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 PRKAB2O43741 272 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 CHGBP05060 677 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 OSBPP22059 807 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 SHMT1P34896 483 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 PSMC4P43686 418 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 GABPAQ06546 454 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 SHROOM1Q2M3G4 852 aaPredicted RBP17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 PI4K2BQ8TCG2 481 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 PUS7LQ9H0K6 701 aaKnown RBP17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 SLC4A4Q9Y6R1 1079 aa17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 TNRC18O15417 2968 aaPredicted RBP17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 BAZ2AQ9UIF9 1905 aaKnown RBP17.29■□□□□ 0.36
R3HCC1-206ENST00000520480 ZSWIM8A7E2V4 1837 aa17.28■□□□□ 0.36
R3HCC1-206ENST00000520480 FMNL1O95466 1100 aaPredicted RBP17.28■□□□□ 0.36
R3HCC1-206ENST00000520480 HOXD10P28358 340 aa17.28■□□□□ 0.36
R3HCC1-206ENST00000520480 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
R3HCC1-206ENST00000520480 SWAP70Q9UH65 585 aa17.28■□□□□ 0.36
R3HCC1-206ENST00000520480 BRCA2P51587 3418 aa17.28■□□□□ 0.36
R3HCC1-206ENST00000520480 MYH8P13535 1937 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 CYP2D6P10635 497 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 GCLCP48506 637 aaPredicted RBP17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 FCGRTP55899 365 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 MLLT1Q03111 559 aaPredicted RBP17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 APPBP2Q92624 585 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 ARMC5Q96C12 935 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 TRIM47Q96LD4 638 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 FEZ1Q99689 392 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 PTCH2Q9Y6C5 1203 aa17.27■□□□□ 0.36
R3HCC1-206ENST00000520480 MGAMO43451 1857 aa17.27■□□□□ 0.35
R3HCC1-206ENST00000520480 CTGFP29279 349 aa17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 SLC9C1Q4G0N8 1177 aa17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 C12orf60Q5U649 245 aa17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 STRBPQ96SI9 672 aaKnown RBP17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 ASCC2Q9H1I8 757 aaPredicted RBP17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 SRRDQ9UH36 339 aa17.26■□□□□ 0.35
R3HCC1-206ENST00000520480 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 USP17L21D6R901 530 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 ECM2O94769 699 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 HOXA7P31268 230 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 USP14P54578 494 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 EVX2Q03828 476 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 FAM110CQ1W6H9 321 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 ANKRD13CQ8N6S4 541 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 OSBP2Q969R2 916 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 FSD1Q9BTV5 496 aa17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 ARPP21Q9UBL0 812 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
R3HCC1-206ENST00000520480 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 MPHOSPH10O00566 681 aaKnown RBP17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 GNAT2P19087 354 aa17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 GIMAP6Q6P9H5 292 aa17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 SMC5Q8IY18 1101 aa17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 KIAA1683Q9H0B3 1180 aa17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 EMILIN3Q9NT22 766 aa17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 STAP2Q9UGK3 403 aa17.24■□□□□ 0.35
R3HCC1-206ENST00000520480 MYPNQ86TC9 1320 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms