RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PRR33A8MZF0 331 aa7.72□□□□□ -1.17
SKP1-207ENST00000520417 GFRA2O00451 464 aa7.72□□□□□ -1.17
SKP1-207ENST00000520417 RNASE1P07998 156 aaKnown RBP7.72□□□□□ -1.17
SKP1-207ENST00000520417 GBP2P32456 591 aaPredicted RBP7.72□□□□□ -1.17
SKP1-207ENST00000520417 RPL6Q02878 288 aaKnown RBP7.72□□□□□ -1.17
SKP1-207ENST00000520417 NKPD1Q17RQ9 610 aa7.72□□□□□ -1.17
SKP1-207ENST00000520417 CDH24Q86UP0 819 aa7.72□□□□□ -1.17
SKP1-207ENST00000520417 RELL1Q8IUW5 271 aa7.72□□□□□ -1.17
SKP1-207ENST00000520417 PHC3Q8NDX5 983 aa7.72□□□□□ -1.17
SKP1-207ENST00000520417 TNKS2Q9H2K2 1166 aa7.72□□□□□ -1.17
SKP1-207ENST00000520417 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.71□□□□□ -1.18
SKP1-207ENST00000520417 MINDY4BA8MYZ0 360 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 BIN1O00499 593 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 CST3P01034 146 aaPredicted RBP7.71□□□□□ -1.18
SKP1-207ENST00000520417 ERCC3P19447 782 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 ZP2Q05996 745 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 BNC2Q6ZN30 1099 aaPredicted RBP7.71□□□□□ -1.18
SKP1-207ENST00000520417 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 HSPA12BQ96MM6 686 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 BCL2L13Q9BXK5 485 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 MBNL3Q9NUK0 354 aaKnown RBP7.71□□□□□ -1.18
SKP1-207ENST00000520417 TJP2Q9UDY2 1190 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 ADAMTS6Q9UKP5 1117 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 CNTNAP4Q9C0A0 1308 aa7.71□□□□□ -1.18
SKP1-207ENST00000520417 H3BS24 57 aa7.7□□□□□ -1.18
SKP1-207ENST00000520417 PF4P02776 101 aa7.7□□□□□ -1.18
SKP1-207ENST00000520417 JUNBP17275 347 aaPredicted RBP7.7□□□□□ -1.18
SKP1-207ENST00000520417 CYP7A1P22680 504 aa7.7□□□□□ -1.18
SKP1-207ENST00000520417 ITGAEP38570 1179 aa7.7□□□□□ -1.18
SKP1-207ENST00000520417 FAM160A1Q05DH4 1040 aa7.7□□□□□ -1.18
SKP1-207ENST00000520417 CAMK2GQ13555 558 aaPredicted RBP7.7□□□□□ -1.18
SKP1-207ENST00000520417 ZNF746Q6NUN9 644 aaPredicted RBP7.7□□□□□ -1.18
SKP1-207ENST00000520417 TMEM87BQ96K49 555 aa7.7□□□□□ -1.18
SKP1-207ENST00000520417 CORINQ9Y5Q5 1042 aa7.7□□□□□ -1.18
SKP1-207ENST00000520417 KRTAP9-6A0A140TA67 174 aa7.69□□□□□ -1.18
SKP1-207ENST00000520417 RBAK-RBAKDNI3L0D1 243 aa7.69□□□□□ -1.18
SKP1-207ENST00000520417 PLCG1P19174 1290 aa7.69□□□□□ -1.18
SKP1-207ENST00000520417 CAP2P40123 477 aa7.69□□□□□ -1.18
SKP1-207ENST00000520417 CLCN7P51798 805 aa7.69□□□□□ -1.18
SKP1-207ENST00000520417 LRRN4CLQ8ND94 238 aa7.69□□□□□ -1.18
SKP1-207ENST00000520417 FMNL2Q96PY5 1086 aa7.69□□□□□ -1.18
SKP1-207ENST00000520417 SNAP47Q5SQN1 464 aa7.68□□□□□ -1.18
SKP1-207ENST00000520417 SLC6A19Q695T7 634 aa7.68□□□□□ -1.18
SKP1-207ENST00000520417 GIPC2Q8TF65 315 aa7.68□□□□□ -1.18
SKP1-207ENST00000520417 ATP13A1Q9HD20 1204 aa7.68□□□□□ -1.18
SKP1-207ENST00000520417 TACC3Q9Y6A5 838 aa7.68□□□□□ -1.18
SKP1-207ENST00000520417 PAPLNO95428 1278 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 F13A1P00488 732 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 ITGB5P18084 799 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 LMNB2Q03252 620 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 ZNF326Q5BKZ1 582 aaKnown RBP7.67□□□□□ -1.18
SKP1-207ENST00000520417 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 MRPL41Q8IXM3 137 aaKnown RBP7.67□□□□□ -1.18
SKP1-207ENST00000520417 FAM13CQ8NE31 585 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 ACSF2Q96CM8 615 aaPredicted RBP7.67□□□□□ -1.18
SKP1-207ENST00000520417 TMEM74Q96NL1 305 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 BCL11AQ9H165 835 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 CARS2Q9HA77 564 aaKnown RBP7.67□□□□□ -1.18
SKP1-207ENST00000520417 GOLGA2P5Q9HBQ8 144 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 PITPNM2Q9BZ72 1349 aa7.67□□□□□ -1.18
SKP1-207ENST00000520417 UPK3BL1B0FP48 263 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 UPK3BL2E5RIL1 263 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 GRIN3BO60391 1043 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 PWP1Q13610 501 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 MCATQ8IVS2 390 aaKnown RBP7.66□□□□□ -1.18
SKP1-207ENST00000520417 GOLM1Q8NBJ4 401 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 GATAD2BQ8WXI9 593 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 UBE2FQ969M7 185 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 KLHL3Q9UH77 587 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 CAPN6Q9Y6Q1 641 aa7.66□□□□□ -1.18
SKP1-207ENST00000520417 ZNF865P0CJ78 1059 aaPredicted RBP7.65□□□□□ -1.18
SKP1-207ENST00000520417 ETV3P41162 512 aa7.65□□□□□ -1.18
SKP1-207ENST00000520417 TNNI2P48788 182 aa7.65□□□□□ -1.18
SKP1-207ENST00000520417 ATG4DQ86TL0 474 aaPredicted RBP7.65□□□□□ -1.18
SKP1-207ENST00000520417 FAM168AQ92567 244 aa7.65□□□□□ -1.18
SKP1-207ENST00000520417 ADAM30Q9UKF2 790 aa7.65□□□□□ -1.18
SKP1-207ENST00000520417 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
SKP1-207ENST00000520417 TLR3O15455 904 aaKnown RBP7.64□□□□□ -1.19
SKP1-207ENST00000520417 CILPO75339 1184 aa7.64□□□□□ -1.19
SKP1-207ENST00000520417 YARSP54577 528 aaKnown RBP7.64□□□□□ -1.19
SKP1-207ENST00000520417 OGFOD2Q6N063 350 aa7.64□□□□□ -1.19
SKP1-207ENST00000520417 CCDC84Q86UT8 332 aaPredicted RBP7.64□□□□□ -1.19
SKP1-207ENST00000520417 RSRP1Q9BUV0 290 aa7.64□□□□□ -1.19
SKP1-207ENST00000520417 SEMA3GQ9NS98 782 aa7.64□□□□□ -1.19
SKP1-207ENST00000520417 KBTBD4Q9NVX7 518 aa7.64□□□□□ -1.19
SKP1-207ENST00000520417 FAM221AA4D161 298 aa7.63□□□□□ -1.19
SKP1-207ENST00000520417 KIR3DL1P43629 444 aa7.63□□□□□ -1.19
SKP1-207ENST00000520417 CHMP4BP1P59074 171 aa7.63□□□□□ -1.19
SKP1-207ENST00000520417 TNK2Q07912 1038 aa7.63□□□□□ -1.19
SKP1-207ENST00000520417 FBXO27Q8NI29 283 aa7.63□□□□□ -1.19
SKP1-207ENST00000520417 RHOVQ96L33 236 aa7.63□□□□□ -1.19
SKP1-207ENST00000520417 COPRSQ9NQ92 184 aa7.63□□□□□ -1.19
SKP1-207ENST00000520417 TMCO4Q5TGY1 634 aa7.62□□□□□ -1.19
SKP1-207ENST00000520417 C22orf34Q6ZV56 151 aa7.62□□□□□ -1.19
SKP1-207ENST00000520417 COX4I2Q96KJ9 171 aa7.62□□□□□ -1.19
SKP1-207ENST00000520417 REV1Q9UBZ9 1251 aa7.62□□□□□ -1.19
SKP1-207ENST00000520417 CEP131Q9UPN4 1083 aa7.62□□□□□ -1.19
SKP1-207ENST00000520417 ST14Q9Y5Y6 855 aa7.62□□□□□ -1.19
SKP1-207ENST00000520417 PHACTR4Q8IZ21 702 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms