RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 N4BP2L2Q92802 583 aaPredicted RBP13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 CCDC42Q96M95 316 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 CXorf56Q9H5V9 222 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 SMIM24O75264 130 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 DACT3Q96B18 629 aaPredicted RBP13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 SH3TC1Q8TE82 1336 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 VWA3AA6NCI4 1184 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 UFL1O94874 794 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 PPP1R2P41236 205 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 PLCD1P51178 756 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 PLIN2Q99541 437 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 CAPN7Q9Y6W3 813 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 A0A1B0GVL5 298 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 TMEM110-MUSTN1A8MSY1 372 aa13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 GABPB2Q8TAK5 448 aaPredicted RBP13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 ZNF594Q96JF6 807 aaPredicted RBP13.47□□□□□ -0.25
ERGIC1-208ENST00000520399 SGSM2O43147 1006 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 ARID5AQ03989 594 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 KLHDC4Q8TBB5 520 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 GBP5Q96PP8 586 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 MAK16Q9BXY0 300 aaKnown RBP13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 MROH5Q6ZUA9 1318 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 MYL5Q02045 173 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 FAM227BQ96M60 508 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 SATB2Q9UPW6 733 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 ANO1Q5XXA6 986 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 CCDC65Q8IXS2 484 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 SH2D4AQ9H788 454 aa13.46□□□□□ -0.25
ERGIC1-208ENST00000520399 WDR46O15213 610 aaKnown RBP13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 CREB3O43889 395 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 PLCB3Q01970 1234 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 TRPC3Q13507 836 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 ARMCX6Q7L4S7 300 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 CABS1Q96KC9 395 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 MYO1CO00159 1063 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 GPAA1O43292 621 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 ELF2Q15723 593 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 PRR16Q569H4 304 aa13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.26
ERGIC1-208ENST00000520399 PNMA6EA0A0J9YXQ4 647 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 ATP6V1E1P36543 226 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 HSPA2P54652 639 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 GCKRQ14397 625 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 INTS8Q75QN2 995 aaKnown RBP13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 POLD1P28340 1107 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 KARSQ15046 597 aaKnown RBP13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 CNGA4Q8IV77 575 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 PPFIA2O75334 1257 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 DNAJC8O75937 253 aaPredicted RBP13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 SNCBQ16143 134 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 JDP2Q8WYK2 163 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 LPIN2Q92539 896 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 PPP1R12CQ9BZL4 782 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 ANKFY1Q9P2R3 1169 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 GUCA1BQ9UMX6 200 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 ANGEL1Q9UNK9 670 aaKnown RBP13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 NEO1Q92859 1461 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 ATP5DP30049 168 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 ZNF445P59923 1031 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 TERF2Q15554 542 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 ZNF569Q5MCW4 686 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 CPLX4Q7Z7G2 160 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 CALR3Q96L12 384 aaKnown RBP13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 ORAI2Q96SN7 254 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 GPCPD1Q9NPB8 672 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 MAST3O60307 1309 aa13.45□□□□□ -0.26
ERGIC1-208ENST00000520399 AKR1B15C9JRZ8 316 aaPredicted RBP13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 ATP8B1O43520 1251 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 CLUL1Q15846 466 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 FYB2Q5VWT5 728 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 KCNK9Q9NPC2 374 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 MTRF1LQ9UGC7 380 aaKnown RBP13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 HNRNPH2P55795 449 aaKnown RBP13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 EVCP57679 992 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 PIK3AP1Q6ZUJ8 805 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 KBTBD3Q8NAB2 608 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 PSPC1Q8WXF1 523 aaKnown RBP13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 CAPZA3Q96KX2 299 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 ZBTB21Q9ULJ3 1066 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 KDRP35968 1356 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 RPL13P26373 211 aaKnown RBP13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 SPATA5Q8NB90 893 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 LZTFL1Q9NQ48 299 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 SYNMO15061 1565 aa13.44□□□□□ -0.26
ERGIC1-208ENST00000520399 GIPC1O14908 333 aa13.43□□□□□ -0.26
ERGIC1-208ENST00000520399 ZEB2O60315 1214 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms