RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CELF2O95319 508 aaKnown RBP21.03■□□□□ 0.96
SDC2-205ENST00000520233 CAP2P40123 477 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 IREB2P48200 963 aaKnown RBP21.03■□□□□ 0.96
SDC2-205ENST00000520233 FKBP1BP68106 108 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 PRKG1Q13976 671 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 RRP1BQ14684 758 aaKnown RBP21.03■□□□□ 0.96
SDC2-205ENST00000520233 ARMC9Q7Z3E5 817 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 JAKMIP1Q96N16 626 aaKnown RBP21.03■□□□□ 0.96
SDC2-205ENST00000520233 TM6SF1Q9BZW5 370 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 ZNF408Q9H9D4 720 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 FZD1Q9UP38 647 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 TSPY2A6NKD2 308 aa21.02■□□□□ 0.96
SDC2-205ENST00000520233 KDM4AO75164 1064 aa21.02■□□□□ 0.96
SDC2-205ENST00000520233 HMGB1P09429 215 aaKnown RBP21.02■□□□□ 0.96
SDC2-205ENST00000520233 TTLL12Q14166 644 aaPredicted RBP21.02■□□□□ 0.96
SDC2-205ENST00000520233 ABCB5Q2M3G0 1257 aa21.02■□□□□ 0.96
SDC2-205ENST00000520233 MB21D2Q8IYB1 491 aaPredicted RBP21.02■□□□□ 0.96
SDC2-205ENST00000520233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.02■□□□□ 0.96
SDC2-205ENST00000520233 NKX2-3Q8TAU0 364 aa21.02■□□□□ 0.96
SDC2-205ENST00000520233 WRNIP1Q96S55 665 aa21.02■□□□□ 0.96
SDC2-205ENST00000520233 GINM1Q9NU53 330 aa21.02■□□□□ 0.96
SDC2-205ENST00000520233 ANGEL1Q9UNK9 670 aaKnown RBP21.02■□□□□ 0.96
SDC2-205ENST00000520233 GDF11O95390 407 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 TSPY3P0CV98 308 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 TSPY8P0CW00 308 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 AKR1B1P15121 316 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 MAP3K9P80192 1104 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 TFAP4Q01664 338 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 FAM47AQ5JRC9 791 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 NEDD1Q8NHV4 660 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 KIF2CQ99661 725 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 GBA2Q9HCG7 927 aaPredicted RBP21.01■□□□□ 0.95
SDC2-205ENST00000520233 ZSWIM6Q9HCJ5 1215 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 CABP5Q9NP86 173 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 ZSWIM5Q9P217 1185 aa21.01■□□□□ 0.95
SDC2-205ENST00000520233 UNCXA6NJT0 531 aa21■□□□□ 0.95
SDC2-205ENST00000520233 MPHOSPH10O00566 681 aaKnown RBP21■□□□□ 0.95
SDC2-205ENST00000520233 CASTP20810 708 aaKnown RBP21■□□□□ 0.95
SDC2-205ENST00000520233 INPP5BP32019 993 aa21■□□□□ 0.95
SDC2-205ENST00000520233 MCM5P33992 734 aa21■□□□□ 0.95
SDC2-205ENST00000520233 NOL9Q5SY16 702 aaKnown RBP21■□□□□ 0.95
SDC2-205ENST00000520233 CST9Q5W186 159 aa21■□□□□ 0.95
SDC2-205ENST00000520233 BLOC1S2Q6QNY1 142 aa21■□□□□ 0.95
SDC2-205ENST00000520233 C2orf69Q8N8R5 385 aa21■□□□□ 0.95
SDC2-205ENST00000520233 TCP11L1Q9NUJ3 509 aa21■□□□□ 0.95
SDC2-205ENST00000520233 PAPPA2Q9BXP8 1791 aa21■□□□□ 0.95
SDC2-205ENST00000520233 PLIN4Q96Q06 1357 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 GH2P01242 217 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 JAG1P78504 1218 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 TMEM179Q6ZVK1 233 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 MOB2Q70IA6 237 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 CYB5R4Q7L1T6 521 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
SDC2-205ENST00000520233 ANKRD13AQ8IZ07 590 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 SCYL3Q8IZE3 742 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 ZBTB21Q9ULJ3 1066 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 WDR19Q8NEZ3 1342 aa20.99■□□□□ 0.95
SDC2-205ENST00000520233 IGKV6D-41A0A0C4DH26 115 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 ASNSP08243 561 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 RPS6KB1P23443 525 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 ANTXR2P58335 489 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 EXOSC10Q01780 885 aaKnown RBP20.98■□□□□ 0.95
SDC2-205ENST00000520233 COL9A3Q14050 684 aaPredicted RBP20.98■□□□□ 0.95
SDC2-205ENST00000520233 LDLRAD1Q5T700 205 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.98■□□□□ 0.95
SDC2-205ENST00000520233 RUFY3Q7L099 469 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 IQCA1Q86XH1 822 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 ZKSCAN4Q969J2 545 aaPredicted RBP20.98■□□□□ 0.95
SDC2-205ENST00000520233 MTA3Q9BTC8 594 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.98■□□□□ 0.95
SDC2-205ENST00000520233 CYP46A1Q9Y6A2 500 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 MYH8P13535 1937 aa20.98■□□□□ 0.95
SDC2-205ENST00000520233 PRC1O43663 620 aa20.97■□□□□ 0.95
SDC2-205ENST00000520233 GUCY1A2P33402 732 aa20.97■□□□□ 0.95
SDC2-205ENST00000520233 SHROOM1Q2M3G4 852 aaPredicted RBP20.97■□□□□ 0.95
SDC2-205ENST00000520233 CCDC178Q5BJE1 867 aa20.97■□□□□ 0.95
SDC2-205ENST00000520233 CSADQ9Y600 493 aa20.97■□□□□ 0.95
SDC2-205ENST00000520233 TRPM7Q96QT4 1865 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 UBE2Q2LH0YL09 131 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 CPA1P15085 419 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 VGLL4Q14135 290 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 SEPT2Q15019 361 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 PPP4R3BQ5MIZ7 849 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 CHST3Q7LGC8 479 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 TMEM87BQ96K49 555 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 ZSCAN10Q96SZ4 725 aaPredicted RBP20.96■□□□□ 0.95
SDC2-205ENST00000520233 UBAC1Q9BSL1 405 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 UPF3BQ9BZI7 483 aaKnown RBP20.96■□□□□ 0.95
SDC2-205ENST00000520233 KANSL2Q9H9L4 492 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 PICK1Q9NRD5 415 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 IL17RBQ9NRM6 502 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 SNCAIPQ9Y6H5 919 aa20.96■□□□□ 0.95
SDC2-205ENST00000520233 SART3Q15020 963 aaKnown RBP20.95■□□□□ 0.94
SDC2-205ENST00000520233 RAB3GAP1Q15042 981 aa20.95■□□□□ 0.94
SDC2-205ENST00000520233 RABEP1Q15276 862 aa20.95■□□□□ 0.94
SDC2-205ENST00000520233 ZKSCAN3Q9BRR0 538 aa20.95■□□□□ 0.94
SDC2-205ENST00000520233 GREB1LQ9C091 1923 aaPredicted RBP20.95■□□□□ 0.94
SDC2-205ENST00000520233 ERICH2A1L162 156 aa20.94■□□□□ 0.94
SDC2-205ENST00000520233 IFIT3O14879 490 aaKnown RBP20.94■□□□□ 0.94
SDC2-205ENST00000520233 NMT2O60551 498 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms