RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 STK3Q13188 491 aa20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 NBPF12Q5TAG4 269 aaPredicted RBP20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 ALDH8A1Q9H2A2 487 aaPredicted RBP20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 TAF1DQ9H5J8 278 aaPredicted RBP20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 LY9Q9HBG7 655 aa20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 IFIT3O14879 490 aaKnown RBP20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 FGD1P98174 961 aa20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 EAPPQ56P03 285 aaPredicted RBP20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 CRACR2BQ8N4Y2 399 aaPredicted RBP20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 AGXT2Q9BYV1 514 aa20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 RRAGCQ9HB90 399 aa20.05■□□□□ 0.8
TSNARE1-205ENST00000520166 TSPY2A6NKD2 308 aa20.04■□□□□ 0.8
TSNARE1-205ENST00000520166 ADM5C9JUS6 153 aa20.04■□□□□ 0.8
TSNARE1-205ENST00000520166 TMEM67Q5HYA8 995 aa20.04■□□□□ 0.8
TSNARE1-205ENST00000520166 METTL16Q86W50 562 aaKnown RBP20.04■□□□□ 0.8
TSNARE1-205ENST00000520166 CHMP4CQ96CF2 233 aa20.04■□□□□ 0.8
TSNARE1-205ENST00000520166 EHD4Q9H223 541 aa20.04■□□□□ 0.8
TSNARE1-205ENST00000520166 LIMCH1Q9UPQ0 1083 aa20.04■□□□□ 0.8
TSNARE1-205ENST00000520166 GDF11O95390 407 aa20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 SEC23AQ15436 765 aa20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 FOXP4Q8IVH2 680 aaPredicted RBP20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 ENAHQ8N8S7 591 aaPredicted RBP20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 ZSCAN10Q96SZ4 725 aaPredicted RBP20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 MYL10Q9BUA6 226 aa20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 TNKSO95271 1327 aa20.03■□□□□ 0.8
TSNARE1-205ENST00000520166 RXRAP19793 462 aa20.02■□□□□ 0.8
TSNARE1-205ENST00000520166 RCSD1Q6JBY9 416 aa20.02■□□□□ 0.8
TSNARE1-205ENST00000520166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.02■□□□□ 0.82e-6■■■■□ 21.6
TSNARE1-205ENST00000520166 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.8
TSNARE1-205ENST00000520166 TSPY3P0CV98 308 aa20.02■□□□□ 0.79
TSNARE1-205ENST00000520166 TSPY8P0CW00 308 aa20.02■□□□□ 0.79
TSNARE1-205ENST00000520166 PCP11498 1178 aaKnown RBP20.02■□□□□ 0.79
TSNARE1-205ENST00000520166 TNNI2P48788 182 aa20.02■□□□□ 0.79
TSNARE1-205ENST00000520166 TATDN1Q6P1N9 297 aa20.02■□□□□ 0.79
TSNARE1-205ENST00000520166 NMRK2Q9NPI5 230 aa20.02■□□□□ 0.79
TSNARE1-205ENST00000520166 ANGEL1Q9UNK9 670 aaKnown RBP20.02■□□□□ 0.79
TSNARE1-205ENST00000520166 COL2A1P02458 1487 aaPredicted RBP20.01■□□□□ 0.79
TSNARE1-205ENST00000520166 PPFIA3O75145 1194 aa20.01■□□□□ 0.79
TSNARE1-205ENST00000520166 CCT2P78371 535 aaKnown RBP20.01■□□□□ 0.79
TSNARE1-205ENST00000520166 BECN1Q14457 450 aa20.01■□□□□ 0.79
TSNARE1-205ENST00000520166 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
TSNARE1-205ENST00000520166 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
TSNARE1-205ENST00000520166 KLF18A0A0U1RQI7 1052 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 PDIA3P30101 505 aaKnown RBP20■□□□□ 0.79
TSNARE1-205ENST00000520166 FMR1Q06787 632 aaKnown RBP eCLIP20■□□□□ 0.79
TSNARE1-205ENST00000520166 CERKLQ49MI3 558 aaPredicted RBP20■□□□□ 0.79
TSNARE1-205ENST00000520166 USP48Q86UV5 1035 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 FBXL16Q8N461 479 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 UBAC1Q9BSL1 405 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 NCOA5Q9HCD5 579 aaKnown RBP20■□□□□ 0.79
TSNARE1-205ENST00000520166 SWAP70Q9UH65 585 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 HPS5Q9UPZ3 1129 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 WDR90Q96KV7 1748 aa20■□□□□ 0.79
TSNARE1-205ENST00000520166 MPHOSPH10O00566 681 aaKnown RBP19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 GUCY1A2P33402 732 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 TNFAIP1Q13829 316 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 WTAPQ15007 396 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 CCDC83Q8IWF9 413 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 CCDC144CPQ8IYA2 1237 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 NEDD1Q8NHV4 660 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 CEP95Q96GE4 821 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 TMEM87BQ96K49 555 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 TRIM34Q9BYJ4 488 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 PRKG1Q13976 671 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 RASGRP2Q7LDG7 609 aa19.99■□□□□ 0.79
TSNARE1-205ENST00000520166 MAP3K10Q02779 954 aa19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 SCRN1Q12765 414 aa19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 ANKRD1Q15327 319 aa19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 NFXL1Q6ZNB6 911 aa19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 CCDC84Q86UT8 332 aaPredicted RBP19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 IQCA1Q86XH1 822 aa19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 DCPSQ96C86 337 aaKnown RBP19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 GLIS2Q9BZE0 524 aaPredicted RBP19.98■□□□□ 0.79
TSNARE1-205ENST00000520166 SSC5DA1L4H1 1573 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 IGKV6D-41A0A0C4DH26 115 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 IQCA1LA6NCM1 817 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 PHF20L1A8MW92 1017 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 LIFRP42702 1097 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 MCM2P49736 904 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 EVCP57679 992 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 SEPT2Q15019 361 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 MAP1SQ66K74 1059 aaPredicted RBP19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 KRT26Q7Z3Y9 468 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 SIAH1Q8IUQ4 282 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 ZNF287Q9HBT7 754 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 SCN4AP35499 1836 aa19.97■□□□□ 0.79
TSNARE1-205ENST00000520166 GH2P01242 217 aa19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 CUL4AQ13619 759 aa19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 IFIT1BQ5T764 474 aaKnown RBP19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 APOA5Q6Q788 366 aa19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 SGMS1Q86VZ5 419 aa19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 HERC5Q9UII4 1024 aaKnown RBP19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 STX8Q9UNK0 236 aa19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 CLEC11AQ9Y240 323 aa19.96■□□□□ 0.79
TSNARE1-205ENST00000520166 MYH8P13535 1937 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms