RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 GSTT1P30711 240 aa5.89□□□□□ -1.47
CSMD3-209ENST00000519485 SLBPQ14493 270 aaKnown RBP eCLIP5.89□□□□□ -1.47
CSMD3-209ENST00000519485 DSC3Q14574 896 aa5.89□□□□□ -1.47
CSMD3-209ENST00000519485 KCNA10Q16322 511 aa5.89□□□□□ -1.47
CSMD3-209ENST00000519485 ZNF746Q6NUN9 644 aaPredicted RBP5.89□□□□□ -1.47
CSMD3-209ENST00000519485 LLGL2Q6P1M3 1020 aa5.89□□□□□ -1.47
CSMD3-209ENST00000519485 ALPK1Q96QP1 1244 aa5.89□□□□□ -1.47
CSMD3-209ENST00000519485 CYP8B1Q9UNU6 501 aa5.89□□□□□ -1.47
CSMD3-209ENST00000519485 ENOX2Q16206 610 aaKnown RBP5.88□□□□□ -1.47
CSMD3-209ENST00000519485 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSMD3-209ENST00000519485 TMC7Q7Z402 723 aa5.88□□□□□ -1.47
CSMD3-209ENST00000519485 EPB41L4BQ9H329 900 aa5.88□□□□□ -1.47
CSMD3-209ENST00000519485 PCDHA4Q9UN74 947 aa5.88□□□□□ -1.47
CSMD3-209ENST00000519485 NPIPB6E9PJ23 425 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 PAGE1O75459 146 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 RAC2P15153 192 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 KIR3DL1P43629 444 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 CIAPIN1Q6FI81 312 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 ELMO3Q96BJ8 720 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 SLC26A8Q96RN1 970 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 DIRC2Q96SL1 478 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 DCP1AQ9NPI6 582 aaPredicted RBP5.87□□□□□ -1.47
CSMD3-209ENST00000519485 CNTNAP4Q9C0A0 1308 aa5.87□□□□□ -1.47
CSMD3-209ENST00000519485 H3BS24 57 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 INHBBP09529 407 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 CDKAL1Q5VV42 579 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 TPTE2Q6XPS3 522 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 ATG14Q6ZNE5 492 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 TMPRSS7Q7RTY8 843 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 ABHD4Q8TB40 342 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 FBF1Q8TES7 1133 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 WNT10AQ9GZT5 417 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 FBRSQ9HAH7 460 aa5.86□□□□□ -1.47
CSMD3-209ENST00000519485 TPX2Q9ULW0 747 aaKnown RBP5.86□□□□□ -1.47
CSMD3-209ENST00000519485 TCAF2A6NFQ2 919 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 GIPC1O14908 333 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 TREHO43280 583 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 HPXP02790 462 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 BUD31P41223 144 aaPredicted RBP5.85□□□□□ -1.47
CSMD3-209ENST00000519485 FGD1P98174 961 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 RASIP1Q5U651 963 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 LRFN4Q6PJG9 635 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 PIWIL2Q8TC59 973 aaKnown RBP5.85□□□□□ -1.47
CSMD3-209ENST00000519485 MIPEPQ99797 713 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 SNCAIPQ9Y6H5 919 aa5.85□□□□□ -1.47
CSMD3-209ENST00000519485 PNMA6FA0A0J9YX94 578 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
CSMD3-209ENST00000519485 CYP7A1P22680 504 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 LINC00310P59036 64 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 INPP5AQ14642 412 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 LETMD1Q6P1Q0 360 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 HDXQ7Z353 690 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 UBE2FQ969M7 185 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 DCTN4Q9UJW0 460 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 TMEM59LQ9UK28 342 aa5.84□□□□□ -1.47
CSMD3-209ENST00000519485 SMG5Q9UPR3 1016 aaKnown RBP5.84□□□□□ -1.47
CSMD3-209ENST00000519485 CST3P01034 146 aaPredicted RBP5.83□□□□□ -1.48
CSMD3-209ENST00000519485 CTSWP56202 376 aa5.83□□□□□ -1.48
CSMD3-209ENST00000519485 NKG7Q16617 165 aa5.83□□□□□ -1.48
CSMD3-209ENST00000519485 TTC6Q86TZ1 520 aa5.83□□□□□ -1.48
CSMD3-209ENST00000519485 HID1Q8IV36 788 aa5.83□□□□□ -1.48
CSMD3-209ENST00000519485 MYLIPQ8WY64 445 aa5.83□□□□□ -1.48
CSMD3-209ENST00000519485 SLAMF8Q9P0V8 285 aa5.83□□□□□ -1.48
CSMD3-209ENST00000519485 TACC3Q9Y6A5 838 aa5.83□□□□□ -1.48
CSMD3-209ENST00000519485 DNAJC25-GNG10A0A024R161 153 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 PRAMEF27A3QJZ7 478 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 SOWAHDA6NJG2 315 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 ESR1P03372 595 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 PLCB3Q01970 1234 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 TNK2Q07912 1038 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 PCNX4Q63HM2 1172 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 RIN3Q8TB24 985 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 GAL3ST3Q96A11 431 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 PLPPR2Q96GM1 343 aa5.82□□□□□ -1.48
CSMD3-209ENST00000519485 PTPN11Q06124 597 aaPredicted RBP5.81□□□□□ -1.48
CSMD3-209ENST00000519485 RALGPS1Q5JS13 557 aa5.81□□□□□ -1.48
CSMD3-209ENST00000519485 IRF2BP1Q8IU81 584 aa5.81□□□□□ -1.48
CSMD3-209ENST00000519485 KCNN1Q92952 543 aa5.81□□□□□ -1.48
CSMD3-209ENST00000519485 OSBPL7Q9BZF2 842 aa5.81□□□□□ -1.48
CSMD3-209ENST00000519485 SP110Q9HB58 689 aa5.81□□□□□ -1.48
CSMD3-209ENST00000519485 ZSWIM5Q9P217 1185 aa5.81□□□□□ -1.48
CSMD3-209ENST00000519485 NUAK1O60285 661 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 CBX7O95931 251 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 HOXA5P20719 270 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 GAB4Q2WGN9 574 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 PRAMEF13Q5VWM6 474 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 LILRA2Q8N149 483 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 C20orf173Q96LM9 149 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 KCNK12Q9HB15 430 aa5.8□□□□□ -1.48
CSMD3-209ENST00000519485 PEX10O60683 326 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 FBXO24O75426 580 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 CELA3AP09093 270 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 ERVFC1P60507 584 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 ETF1P62495 437 aaKnown RBP5.79□□□□□ -1.48
CSMD3-209ENST00000519485 PDE4CQ08493 712 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 NR0B2Q15466 257 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 SV2BQ7L1I2 683 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 MRPL41Q8IXM3 137 aaKnown RBP5.79□□□□□ -1.48
CSMD3-209ENST00000519485 PDZD8Q8NEN9 1154 aa5.79□□□□□ -1.48
CSMD3-209ENST00000519485 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms