RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KLF18A0A0U1RQI7 1052 aa16.96■□□□□ 0.31
CLN8-204ENST00000519254 SH2B2O14492 632 aaPredicted RBP16.96■□□□□ 0.31
CLN8-204ENST00000519254 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.31
CLN8-204ENST00000519254 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
CLN8-204ENST00000519254 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
CLN8-204ENST00000519254 ZSWIM5Q9P217 1185 aa16.96■□□□□ 0.31
CLN8-204ENST00000519254 ANGEL1Q9UNK9 670 aaKnown RBP16.96■□□□□ 0.31
CLN8-204ENST00000519254 EPS15P42566 896 aa16.95■□□□□ 0.3
CLN8-204ENST00000519254 MMP14P50281 582 aa16.95■□□□□ 0.3
CLN8-204ENST00000519254 PDE4BQ07343 736 aa16.95■□□□□ 0.3
CLN8-204ENST00000519254 CDC37L1Q7L3B6 337 aa16.95■□□□□ 0.3
CLN8-204ENST00000519254 SLC44A5Q8NCS7 719 aa16.95■□□□□ 0.3
CLN8-204ENST00000519254 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
CLN8-204ENST00000519254 ZBED3Q96IU2 234 aaPredicted RBP16.95■□□□□ 0.3
CLN8-204ENST00000519254 TMEM87BQ96K49 555 aa16.95■□□□□ 0.3
CLN8-204ENST00000519254 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
CLN8-204ENST00000519254 PTPDC1A2A3K4 754 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 RANBP6O60518 1105 aaKnown RBP16.94■□□□□ 0.3
CLN8-204ENST00000519254 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
CLN8-204ENST00000519254 TTC6Q86TZ1 520 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 SCAF8Q9UPN6 1271 aaKnown RBP16.94■□□□□ 0.3
CLN8-204ENST00000519254 ROBO3Q96MS0 1386 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 HLA-DOAP06340 250 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 TRPM4Q8TD43 1214 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 ESR2Q92731 530 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 ZKSCAN3Q9BRR0 538 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 MKNK2Q9HBH9 465 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLN8-204ENST00000519254 ATP6V1DQ9Y5K8 247 aa16.94■□□□□ 0.3
CLN8-204ENST00000519254 ASTN2O75129 1339 aaPredicted RBP16.93■□□□□ 0.3
CLN8-204ENST00000519254 MYH15Q9Y2K3 1946 aa16.93■□□□□ 0.3
CLN8-204ENST00000519254 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
CLN8-204ENST00000519254 ENTPD3O75355 529 aa16.93■□□□□ 0.3
CLN8-204ENST00000519254 HMGN5P82970 282 aaKnown RBP16.93■□□□□ 0.3
CLN8-204ENST00000519254 GDPD2Q9HCC8 539 aa16.93■□□□□ 0.3
CLN8-204ENST00000519254 CNPY2Q9Y2B0 182 aa16.93■□□□□ 0.3
CLN8-204ENST00000519254 PCP11498 1178 aaKnown RBP16.92■□□□□ 0.3
CLN8-204ENST00000519254 FAM47AQ5JRC9 791 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 C16orf86Q6ZW13 317 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 SH3BP5LQ7L8J4 393 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 USP48Q86UV5 1035 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 TMEM87AQ8NBN3 555 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 ORC4O43929 436 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
CLN8-204ENST00000519254 FGRP09769 529 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 FDPSP14324 419 aaKnown RBP16.92■□□□□ 0.3
CLN8-204ENST00000519254 LIFRP42702 1097 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 CDK8P49336 464 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
CLN8-204ENST00000519254 DHX36Q9H2U1 1008 aaKnown RBP16.92■□□□□ 0.3
CLN8-204ENST00000519254 SERPINB13Q9UIV8 391 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 HACL1Q9UJ83 578 aa16.92■□□□□ 0.3
CLN8-204ENST00000519254 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 TSPY2A6NKD2 308 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 FAM196BA6NMK8 535 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 IFIT3O14879 490 aaKnown RBP16.91■□□□□ 0.3
CLN8-204ENST00000519254 SLURP2P0DP57 97 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 DNM1Q05193 864 aaKnown RBP16.91■□□□□ 0.3
CLN8-204ENST00000519254 APOA5Q6Q788 366 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 CSRNP1Q96S65 589 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 UBAC1Q9BSL1 405 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
CLN8-204ENST00000519254 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
CLN8-204ENST00000519254 FAM151AQ8WW52 585 aa16.9■□□□□ 0.3
CLN8-204ENST00000519254 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
CLN8-204ENST00000519254 ZC3H4Q9UPT8 1303 aaKnown RBP16.9■□□□□ 0.3
CLN8-204ENST00000519254 DHX16O60231 1041 aaKnown RBP16.89■□□□□ 0.3
CLN8-204ENST00000519254 TNNI2P48788 182 aa16.89■□□□□ 0.3
CLN8-204ENST00000519254 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.3
CLN8-204ENST00000519254 ANGEL2Q5VTE6 544 aaKnown RBP16.89■□□□□ 0.3
CLN8-204ENST00000519254 FKBP1CQ5VVH2 108 aa16.89■□□□□ 0.3
CLN8-204ENST00000519254 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.3
CLN8-204ENST00000519254 PI4KBQ9UBF8 816 aa16.89■□□□□ 0.3
CLN8-204ENST00000519254 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 ERICH2A1L162 156 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 GADD45BO75293 160 aaPredicted RBP16.89■□□□□ 0.29
CLN8-204ENST00000519254 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
CLN8-204ENST00000519254 RASA1P20936 1047 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 HIRAP54198 1017 aaPredicted RBP16.89■□□□□ 0.29
CLN8-204ENST00000519254 TFAP4Q01664 338 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 GABPAQ06546 454 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
CLN8-204ENST00000519254 ADARB2Q9NS39 739 aaKnown RBP16.89■□□□□ 0.29
CLN8-204ENST00000519254 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms