RNA–Protein interactions for RNA: ENST00000518858.1

CLVS1-204, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,980 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-204ENST00000518858 SMARCC1Q92922 1105 aaPredicted RBP9.31□□□□□ -0.92
CLVS1-204ENST00000518858 HINFPQ9BQA5 517 aa9.31□□□□□ -0.92
CLVS1-204ENST00000518858 POLD4Q9HCU8 107 aa9.31□□□□□ -0.92
CLVS1-204ENST00000518858 CFAP45Q9UL16 551 aa9.31□□□□□ -0.92
CLVS1-204ENST00000518858 ODF2LQ9ULJ1 636 aa9.31□□□□□ -0.92
CLVS1-204ENST00000518858 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
CLVS1-204ENST00000518858 IGSF1Q8N6C5 1336 aa9.31□□□□□ -0.92
CLVS1-204ENST00000518858 PRPF6O94906 941 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 ZNF202O95125 648 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 ZKSCAN1P17029 563 aaPredicted RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 RDXP35241 583 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 NDUFA8P51970 172 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 TBC1D8BQ0IIM8 1120 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 NECTIN1Q15223 517 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 NOA1Q8NC60 698 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 BAG1Q99933 345 aaPredicted RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 CYP27B1O15528 508 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 ARHGAP6O43182 974 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 HSP90B1P14625 803 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 IRAK1P51617 712 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 TXNRD1Q16881 649 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 C11orf91Q3C1V1 193 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 ACBD3Q9H3P7 528 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 NPDC1Q9NQX5 325 aaPredicted RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 CDHR2Q9BYE9 1310 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 EPB41L2O43491 1005 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 A1BGP04217 495 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 GSPT2Q8IYD1 628 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 MSANTD4Q8NCY6 345 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 TBC1D22AQ8WUA7 517 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 FAM227BQ96M60 508 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 SEC62Q99442 399 aaKnown RBP9.3□□□□□ -0.92
CLVS1-204ENST00000518858 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 LRRC2Q9BYS8 371 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 FAM107BQ9H098 131 aa9.3□□□□□ -0.92
CLVS1-204ENST00000518858 GCFC2P16383 781 aaKnown RBP9.29□□□□□ -0.92
CLVS1-204ENST00000518858 BLOC1S2Q6QNY1 142 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 CEP57Q86XR8 500 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 BORCS6Q96GS4 357 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 ABL1P00519 1130 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 IL13P35225 146 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 GGCXP38435 758 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 AKAP17AQ02040 695 aaKnown RBP9.29□□□□□ -0.92
CLVS1-204ENST00000518858 TEX11Q8IYF3 940 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 FMR1NBQ8N0W7 255 aaPredicted RBP9.29□□□□□ -0.92
CLVS1-204ENST00000518858 TM6SF1Q9BZW5 370 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 RCOR1Q9UKL0 485 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 PCDHA7Q9UN72 937 aa9.29□□□□□ -0.92
CLVS1-204ENST00000518858 ITGB4P16144 1822 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 TOGARAM1Q9Y4F4 1720 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 POM121CA8CG34 1229 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 KIF3CO14782 793 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 SLC27A2O14975 620 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 SSBP05455 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLVS1-204ENST00000518858 FNTAP49354 379 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 KIF4BQ2VIQ3 1234 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 IQCA1Q86XH1 822 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 PDCD7Q8N8D1 485 aaKnown RBP9.28□□□□□ -0.92
CLVS1-204ENST00000518858 RHPN1Q8TCX5 695 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLVS1-204ENST00000518858 TRIM6Q9C030 488 aaPredicted RBP9.28□□□□□ -0.92
CLVS1-204ENST00000518858 GPCPD1Q9NPB8 672 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 SOWAHDA6NJG2 315 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 GIGYF1O75420 1035 aaPredicted RBP9.28□□□□□ -0.92
CLVS1-204ENST00000518858 PEX19P40855 299 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 CCT4P50991 539 aaKnown RBP9.28□□□□□ -0.92
CLVS1-204ENST00000518858 ZNF569Q5MCW4 686 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 ARMC3Q5W041 872 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 TMEM92Q6UXU6 159 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 VSTM4Q8IW00 320 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 STAG1Q8WVM7 1258 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 INTS13Q9NVM9 706 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 CDC23Q9UJX2 597 aa9.28□□□□□ -0.92
CLVS1-204ENST00000518858 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.28□□□□□ -0.92
CLVS1-204ENST00000518858 RPSAP08865 295 aaKnown RBP9.27□□□□□ -0.92
CLVS1-204ENST00000518858 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.92
CLVS1-204ENST00000518858 NCAPH2Q6IBW4 605 aa9.27□□□□□ -0.92
CLVS1-204ENST00000518858 KCNB2Q92953 911 aa9.27□□□□□ -0.92
CLVS1-204ENST00000518858 LY75O60449 1722 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 LRP5O75197 1615 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 NEDD4P46934 1319 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 KLHL33A6NCF5 533 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 SLC3A2P08195 630 aaKnown RBP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 PDHBP11177 359 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 RBM5P52756 815 aaKnown RBP eCLIP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 GNGT1P63211 74 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 E2F5Q15329 346 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 PREPLQ4J6C6 727 aaPredicted RBP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 MRPS27Q92552 414 aaKnown RBP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 CDC5LQ99459 802 aaKnown RBP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 HPCAL4Q9UM19 191 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 SOS1Q07889 1333 aaPredicted RBP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 MPHOSPH10O00566 681 aaKnown RBP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 CHUKO15111 745 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 AP1G2O75843 785 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 CLNS1AP54105 237 aaKnown RBP9.27□□□□□ -0.93
CLVS1-204ENST00000518858 PPARDQ03181 441 aa9.27□□□□□ -0.93
CLVS1-204ENST00000518858 TSR1Q2NL82 804 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms