RNA–Protein interactions for RNA: ENST00000518738.1

ATP6V1C1-202, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1C1, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-202ENST00000518738 CRKP46108 304 aa17.21■□□□□ 0.35
ATP6V1C1-202ENST00000518738 PICALMQ13492 652 aa17.21■□□□□ 0.35
ATP6V1C1-202ENST00000518738 OTUD7BQ6GQQ9 843 aa17.21■□□□□ 0.35
ATP6V1C1-202ENST00000518738 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
ATP6V1C1-202ENST00000518738 USP40Q9NVE5 1235 aa17.21■□□□□ 0.35
ATP6V1C1-202ENST00000518738 STK36Q9NRP7 1315 aa17.21■□□□□ 0.34
ATP6V1C1-202ENST00000518738 FMNL1O95466 1100 aaPredicted RBP17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CALM1P0DP23 149 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CALM2P0DP24 149 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CALM3P0DP25 149 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 C16orf86Q6ZW13 317 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 AIFM3Q96NN9 605 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 PSMD1Q99460 953 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 WDHD1O75717 1129 aaPredicted RBP17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TSPY3P0CV98 308 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TSPY8P0CW00 308 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TGFB2P61812 414 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CDC42EP5Q6NZY7 148 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 SPATA32Q96LK8 384 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CFAP45Q9UL16 551 aa17.2■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ELP1O95163 1332 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 DDAH1O94760 285 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CDK8P49336 464 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TROAPQ12815 778 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TPRNQ4KMQ1 711 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TTC6Q86TZ1 520 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CCDC82Q8N4S0 544 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 WASF1Q92558 559 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 PSME4Q14997 1843 aa17.19■□□□□ 0.34
ATP6V1C1-202ENST00000518738 RASA1P20936 1047 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ZSCAN23Q3MJ62 389 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CRACR2BQ8N4Y2 399 aaPredicted RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 DDX4Q9NQI0 724 aaKnown RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TMEM63CQ9P1W3 806 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 MYH8P13535 1937 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 YDJCA8MPS7 323 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 RBM5P52756 815 aaKnown RBP eCLIP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TRIM29Q14134 588 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 R3HDM1Q15032 1099 aaKnown RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CCDC178Q5BJE1 867 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 SOGA3Q5TF21 947 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 RCSD1Q6JBY9 416 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 NBPF11Q86T75 865 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 DGKHQ86XP1 1220 aa17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 LEO1Q8WVC0 666 aaPredicted RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 SYAP1Q96A49 352 aaPredicted RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ILDR1Q86SU0 546 aaPredicted RBP17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 LARGE2Q8N3Y3 721 aa17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ZNF277Q9NRM2 450 aaPredicted RBP17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 BAZ2BQ9UIF8 2168 aaKnown RBP17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 UBE2Q2LH0YL09 131 aa17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 KRT40Q6A162 431 aa17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ATL3Q6DD88 541 aa17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CTCFLQ8NI51 663 aaPredicted RBP17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ZNF396Q96N95 335 aaPredicted RBP17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 KAT14Q9H8E8 782 aa17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 TCP11L1Q9NUJ3 509 aa17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 SERPINA10Q9UK55 444 aa17.17■□□□□ 0.34
ATP6V1C1-202ENST00000518738 DEXIO95424 95 aa17.16■□□□□ 0.34
ATP6V1C1-202ENST00000518738 BRAPQ7Z569 592 aa17.16■□□□□ 0.34
ATP6V1C1-202ENST00000518738 PPP1R1BQ9UD71 204 aaPredicted RBP17.16■□□□□ 0.34
ATP6V1C1-202ENST00000518738 FSD2A1L4K1 749 aa17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 GUCY1A2P33402 732 aa17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 AKAP17AQ02040 695 aaKnown RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 KIF23Q02241 960 aaPredicted RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ANKS1AQ92625 1134 aa17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 RNF26Q9BY78 433 aaPredicted RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 OSBPL5Q9H0X9 879 aaPredicted RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 BRCA1P38398 1863 aaKnown RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
ATP6V1C1-202ENST00000518738 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 ZNF445P59923 1031 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 NFIAQ12857 509 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 USP28Q96RU2 1077 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 SERPINB13Q9UIV8 391 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 STX8Q9UNK0 236 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 KIF5BP33176 963 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 FUT2Q10981 343 aa17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.33
ATP6V1C1-202ENST00000518738 L1TD1Q5T7N2 865 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms