RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 PSMD2Q13200 908 aa7.94□□□□□ -1.14
CSMD1-203ENST00000518151 SEPT6Q14141 434 aa7.94□□□□□ -1.14
CSMD1-203ENST00000518151 NKG7Q16617 165 aa7.94□□□□□ -1.14
CSMD1-203ENST00000518151 TSNAXIP1Q2TAA8 658 aa7.94□□□□□ -1.14
CSMD1-203ENST00000518151 PRAMEF13Q5VWM6 474 aa7.94□□□□□ -1.14
CSMD1-203ENST00000518151 AEBP1Q8IUX7 1158 aa7.94□□□□□ -1.14
CSMD1-203ENST00000518151 NOC4LQ9BVI4 516 aaKnown RBP7.94□□□□□ -1.14
CSMD1-203ENST00000518151 GFRA2O00451 464 aa7.93□□□□□ -1.14
CSMD1-203ENST00000518151 FARP2O94887 1054 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-203ENST00000518151 ITGAEP38570 1179 aa7.93□□□□□ -1.14
CSMD1-203ENST00000518151 KIR3DL1P43629 444 aa7.93□□□□□ -1.14
CSMD1-203ENST00000518151 XPCQ01831 940 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-203ENST00000518151 MAP3K11Q16584 847 aa7.93□□□□□ -1.14
CSMD1-203ENST00000518151 THAP5Q7Z6K1 395 aa7.93□□□□□ -1.14
CSMD1-203ENST00000518151 HSPA12BQ96MM6 686 aa7.93□□□□□ -1.14
CSMD1-203ENST00000518151 PCDHB5Q9Y5E4 795 aa7.93□□□□□ -1.14
CSMD1-203ENST00000518151 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-203ENST00000518151 AFMP43652 599 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 DAB2P98082 770 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 FZD5Q13467 585 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 TAF1CQ15572 869 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-203ENST00000518151 ZSWIM9Q86XI8 627 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 NPAS4Q8IUM7 802 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 MRPL41Q8IXM3 137 aaKnown RBP7.92□□□□□ -1.14
CSMD1-203ENST00000518151 CCDC120Q96HB5 630 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 PRDM7Q9NQW5 492 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 FAM53CQ9NYF3 392 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 PARP2Q9UGN5 583 aa7.92□□□□□ -1.14
CSMD1-203ENST00000518151 PGRP06401 933 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 ETV3P41162 512 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 CDK8P49336 464 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 RPL6Q02878 288 aaKnown RBP7.91□□□□□ -1.14
CSMD1-203ENST00000518151 PKN1Q16512 942 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 KCNMB1Q16558 191 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 CDKAL1Q5VV42 579 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 SLC6A19Q695T7 634 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 CAPN6Q9Y6Q1 641 aa7.91□□□□□ -1.14
CSMD1-203ENST00000518151 PRR33A8MZF0 331 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 MEI1Q5TIA1 1274 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 TMC4Q7Z404 712 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 CCDC84Q86UT8 332 aaPredicted RBP7.9□□□□□ -1.14
CSMD1-203ENST00000518151 XAGE3Q8WTP9 111 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 KRTAP9-9Q9BYP9 154 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 KRTAP9-4Q9BYQ2 154 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 CARS2Q9HA77 564 aaKnown RBP7.9□□□□□ -1.14
CSMD1-203ENST00000518151 ATP13A1Q9HD20 1204 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 SEMA3GQ9NS98 782 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 ADAM30Q9UKF2 790 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 CTNND2Q9UQB3 1225 aa7.9□□□□□ -1.14
CSMD1-203ENST00000518151 CBX7O95931 251 aa7.89□□□□□ -1.15
CSMD1-203ENST00000518151 TFE3P19532 575 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-203ENST00000518151 KSR1Q8IVT5 923 aa7.89□□□□□ -1.15
CSMD1-203ENST00000518151 PIWIL2Q8TC59 973 aaKnown RBP7.89□□□□□ -1.15
CSMD1-203ENST00000518151 TMEM87BQ96K49 555 aa7.89□□□□□ -1.15
CSMD1-203ENST00000518151 SLC38A3Q99624 504 aa7.89□□□□□ -1.15
CSMD1-203ENST00000518151 ST14Q9Y5Y6 855 aa7.89□□□□□ -1.15
CSMD1-203ENST00000518151 H3BS24 57 aa7.88□□□□□ -1.15
CSMD1-203ENST00000518151 BPNT1O95861 308 aa7.88□□□□□ -1.15
CSMD1-203ENST00000518151 ZNF648Q5T619 568 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-203ENST00000518151 MCATQ8IVS2 390 aaKnown RBP7.88□□□□□ -1.15
CSMD1-203ENST00000518151 RIN3Q8TB24 985 aa7.88□□□□□ -1.15
CSMD1-203ENST00000518151 CRELD1Q96HD1 420 aa7.88□□□□□ -1.15
CSMD1-203ENST00000518151 RNF19AQ9NV58 838 aa7.88□□□□□ -1.15
CSMD1-203ENST00000518151 TJP2Q9UDY2 1190 aa7.88□□□□□ -1.15
CSMD1-203ENST00000518151 ERCC3P19447 782 aa7.87□□□□□ -1.15
CSMD1-203ENST00000518151 JAG1P78504 1218 aa7.87□□□□□ -1.15
CSMD1-203ENST00000518151 JARID2Q92833 1246 aaPredicted RBP7.87□□□□□ -1.15
CSMD1-203ENST00000518151 MRS2Q9HD23 443 aa7.87□□□□□ -1.15
CSMD1-203ENST00000518151 USP31Q70CQ4 1352 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 CNTNAP4Q9C0A0 1308 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 LRRC10BA6NIK2 292 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 SORBS3O60504 671 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 GDNFP39905 211 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 DNAJC14Q6Y2X3 702 aaPredicted RBP7.86□□□□□ -1.15
CSMD1-203ENST00000518151 TMPRSS7Q7RTY8 843 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 CDH24Q86UP0 819 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 PHC3Q8NDX5 983 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 UBE2FQ969M7 185 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 DPH2Q9BQC3 489 aaPredicted RBP7.86□□□□□ -1.15
CSMD1-203ENST00000518151 TLR6Q9Y2C9 796 aa7.86□□□□□ -1.15
CSMD1-203ENST00000518151 YARSP54577 528 aaKnown RBP7.85□□□□□ -1.15
CSMD1-203ENST00000518151 PWP1Q13610 501 aa7.85□□□□□ -1.15
CSMD1-203ENST00000518151 BHLHE22Q8NFJ8 381 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-203ENST00000518151 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
CSMD1-203ENST00000518151 FAM84AQ96KN4 292 aa7.85□□□□□ -1.15
CSMD1-203ENST00000518151 TRIT1Q9H3H1 467 aaKnown RBP7.85□□□□□ -1.15
CSMD1-203ENST00000518151 ZSWIM5Q9P217 1185 aa7.85□□□□□ -1.15
CSMD1-203ENST00000518151 GLI1P08151 1106 aa7.84□□□□□ -1.15
CSMD1-203ENST00000518151 LMNB2Q03252 620 aa7.84□□□□□ -1.15
CSMD1-203ENST00000518151 TNK2Q07912 1038 aa7.84□□□□□ -1.15
CSMD1-203ENST00000518151 ACSF2Q96CM8 615 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-203ENST00000518151 ALPK1Q96QP1 1244 aa7.84□□□□□ -1.15
CSMD1-203ENST00000518151 CEP131Q9UPN4 1083 aa7.84□□□□□ -1.15
CSMD1-203ENST00000518151 CTSHP09668 335 aa7.83□□□□□ -1.16
CSMD1-203ENST00000518151 RAC2P15153 192 aa7.83□□□□□ -1.16
CSMD1-203ENST00000518151 PLCG1P19174 1290 aa7.83□□□□□ -1.16
CSMD1-203ENST00000518151 TMEM67Q5HYA8 995 aa7.83□□□□□ -1.16
CSMD1-203ENST00000518151 FBXO33Q7Z6M2 555 aa7.83□□□□□ -1.16
CSMD1-203ENST00000518151 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
CSMD1-203ENST00000518151 CYB5D2Q8WUJ1 264 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms