RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
TOP1MT-203ENST00000517857 HELLSQ9NRZ9 838 aa17.43■□□□□ 0.38
TOP1MT-203ENST00000517857 ZBTB21Q9ULJ3 1066 aa17.43■□□□□ 0.38
TOP1MT-203ENST00000517857 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
TOP1MT-203ENST00000517857 PCNTO95613 3336 aa17.43■□□□□ 0.38
TOP1MT-203ENST00000517857 TESPA1A2RU30 521 aaPredicted RBP17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 USP17L5A8MUK1 530 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 MINDY4BA8MYZ0 360 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 TBC1D8O95759 1140 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 GH2P01242 217 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 SDSP20132 328 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 SHMT1P34896 483 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 SHROOM1Q2M3G4 852 aaPredicted RBP17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 C12orf60Q5U649 245 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 GIMAP6Q6P9H5 292 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 CTR9Q6PD62 1173 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 GADL1Q6ZQY3 521 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 TICAM2Q86XR7 235 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 SLC44A5Q8NCS7 719 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 NAPBQ9H115 298 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 SWAP70Q9UH65 585 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 CASP8AP2Q9UKL3 1982 aa17.42■□□□□ 0.38
TOP1MT-203ENST00000517857 LOC285556D6RIA3 1793 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 PATL2C9JE40 543 aaKnown RBP17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 HIP1O00291 1037 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 CXCL11O14625 94 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 GABPAQ06546 454 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 ABCB5Q2M3G0 1257 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 TATDN1Q6P1N9 297 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 STK11IPQ8N1F8 1099 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 PTPN18Q99952 460 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 TBC1D2Q9BYX2 928 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 CABP5Q9NP86 173 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 GINM1Q9NU53 330 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 AFG3L2Q9Y4W6 797 aa17.41■□□□□ 0.38
TOP1MT-203ENST00000517857 JAG1P78504 1218 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 SPP2Q13103 211 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 TAF1CQ15572 869 aaPredicted RBP17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 FAM43AQ8N2R8 423 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 ZNF280CQ8ND82 737 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 CCDC171Q6TFL3 1326 aa17.4■□□□□ 0.38
TOP1MT-203ENST00000517857 A0A0G2JLL6 359 aaPredicted RBP17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 BTBD19C9JJ37 291 aa17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 SMIM22K7EJ46 135 aa17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 MFAP1P55081 439 aaKnown RBP17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 SBK1Q52WX2 424 aa17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 CWC27Q6UX04 472 aaKnown RBP17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 C16orf86Q6ZW13 317 aa17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 PRRT2Q7Z6L0 340 aaPredicted RBP17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
TOP1MT-203ENST00000517857 CDK8P49336 464 aa17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 CRHR2Q13324 411 aa17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 MTMR2Q13614 643 aa17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 VPS53Q5VIR6 699 aa17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 FASTKD5Q7L8L6 764 aaKnown RBP17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 ZNF589Q86UQ0 364 aaPredicted RBP17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 SKAP1Q86WV1 359 aa17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 FEZ1Q99689 392 aa17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
TOP1MT-203ENST00000517857 PDHXO00330 501 aa17.37■□□□□ 0.37
TOP1MT-203ENST00000517857 HMGCS2P54868 508 aa17.37■□□□□ 0.37
TOP1MT-203ENST00000517857 ANKRD23Q86SG2 305 aa17.37■□□□□ 0.37
TOP1MT-203ENST00000517857 WDR18Q9BV38 432 aa17.37■□□□□ 0.37
TOP1MT-203ENST00000517857 MKNK2Q9HBH9 465 aa17.37■□□□□ 0.37
TOP1MT-203ENST00000517857 ZFYVE28Q9HCC9 887 aa17.37■□□□□ 0.37
TOP1MT-203ENST00000517857 ZCCHC17Q9NP64 241 aaKnown RBP17.37■□□□□ 0.37
TOP1MT-203ENST00000517857 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
TOP1MT-203ENST00000517857 AKR1B1P15121 316 aa17.36■□□□□ 0.37
TOP1MT-203ENST00000517857 SEPT2Q15019 361 aa17.36■□□□□ 0.37
TOP1MT-203ENST00000517857 TMEM179Q6ZVK1 233 aa17.36■□□□□ 0.37
TOP1MT-203ENST00000517857 CFHR5Q9BXR6 569 aa17.36■□□□□ 0.37
TOP1MT-203ENST00000517857 R3HDMLQ9H3Y0 253 aa17.36■□□□□ 0.37
TOP1MT-203ENST00000517857 TMOD4Q9NZQ9 345 aa17.36■□□□□ 0.37
TOP1MT-203ENST00000517857 LAMA4Q16363 1823 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 USP17L10C9JJH3 530 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 GPR25O00155 361 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 FOXP2O15409 715 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 PPARAQ07869 468 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 MOGSQ13724 837 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 ZYXQ15942 572 aaKnown RBP17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 PROCA1Q8NCQ7 364 aaPredicted RBP17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 CCDC17Q96LX7 622 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 PARK7Q99497 189 aaKnown RBP17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 ZNF287Q9HBT7 754 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
TOP1MT-203ENST00000517857 PRDM1O75626 825 aa17.34■□□□□ 0.37
TOP1MT-203ENST00000517857 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
TOP1MT-203ENST00000517857 BACE1P56817 501 aa17.34■□□□□ 0.37
TOP1MT-203ENST00000517857 DGKZQ13574 1117 aa17.34■□□□□ 0.37
TOP1MT-203ENST00000517857 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
TOP1MT-203ENST00000517857 ZNF296Q8WUU4 475 aaPredicted RBP17.34■□□□□ 0.37
TOP1MT-203ENST00000517857 RUFY2Q8WXA3 655 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms