RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 FAN1Q9Y2M0 1017 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 KAT6BQ8WYB5 2073 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 DOT1LQ8TEK3 1739 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 HEG1Q9ULI3 1381 aa3.49□□□□□ -1.85
SKP1-204ENST00000517691 PNPLA7Q6ZV29 1317 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 CCDC194A0A1B0GVG4 234 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 TNFRSF10BO14763 440 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 ZIC2O95409 532 aaPredicted RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 POLD1P28340 1107 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 KRT24Q2M2I5 525 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 FBLN7Q53RD9 439 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 COX20Q5RI15 118 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 CCDC181Q5TID7 509 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 AMIGO3Q86WK7 504 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 WDR63Q8IWG1 891 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 RGL4Q8IZJ4 473 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 LINC00528Q8N1L1 170 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 KDF1Q8NAX2 398 aaPredicted RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 XAGE2Q96GT9 111 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 C2orf49Q9BVC5 232 aaPredicted RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 ZBTB1Q9Y2K1 713 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 USP3Q9Y6I4 520 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 SHANK3Q9BYB0 1731 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 TNS1Q9HBL0 1735 aaKnown RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 CNTNAP4Q9C0A0 1308 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 A0A087WZG4 1122 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 SCAMP3O14828 347 aaKnown RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 FAM13AO94988 1023 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 GNRH1P01148 92 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 ZNF853P0CG23 659 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 ATP2B1P20020 1258 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 MPSTP25325 297 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 SMTNP53814 917 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 HNRNPUQ00839 825 aaKnown RBP eCLIP3.48□□□□□ -1.85
SKP1-204ENST00000517691 DHX9Q08211 1270 aaKnown RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 COL19A1Q14993 1142 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 MTFR1Q15390 333 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 FAM26DQ5JW98 314 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 DUSP27Q5VZP5 1158 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 USPL1Q5W0Q7 1092 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 TMC7Q7Z402 723 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 JAZF1Q86VZ6 243 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 METTL16Q86W50 562 aaKnown RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 NT5DC4Q86YG4 428 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 ZSCAN29Q8IWY8 852 aaPredicted RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 SMC5Q8IY18 1101 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 CCDC116Q8IYX3 515 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 STAG2Q8N3U4 1231 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 ACDQ96AP0 544 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 MTFR1LQ9H019 292 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 ZSWIM4Q9H7M6 989 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 SRP68Q9UHB9 627 aaKnown RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 DMGDHQ9UI17 866 aaKnown RBP3.48□□□□□ -1.85
SKP1-204ENST00000517691 HRH3Q9Y5N1 445 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 BTAF1O14981 1849 aa3.48□□□□□ -1.85
SKP1-204ENST00000517691 MRC1P22897 1456 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 TOGARAM1Q9Y4F4 1720 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 SBF2Q86WG5 1849 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 A6NJY4 79 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 TCERG1O14776 1098 aaKnown RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 ZBTB39O15060 712 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 NPHP1O15259 732 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 PPP1R12BO60237 982 aaPredicted RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 FZD6O60353 706 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 IL2RAP01589 272 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 IGHA2P01877 340 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 IL6STP40189 918 aaPredicted RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 TNNI2P48788 182 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 SETQ01105 290 aaPredicted RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 AIMP1Q12904 312 aaKnown RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 NR5A1Q13285 461 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 MRPL58Q14197 206 aaKnown RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 C16orf46Q6P387 395 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 KIF6Q6ZMV9 814 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 BICDL1Q6ZP65 573 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 SLC9A9Q8IVB4 645 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 TMTC2Q8N394 836 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 C8orf58Q8NAV2 365 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 AGBL1Q96MI9 1066 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 RBCK1Q9BYM8 510 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 CAPN10Q9HC96 672 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 RAB6BQ9NRW1 208 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 LRFN2Q9ULH4 789 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 SOS1Q07889 1333 aaPredicted RBP3.47□□□□□ -1.85
SKP1-204ENST00000517691 IL16Q14005 1332 aa3.47□□□□□ -1.85
SKP1-204ENST00000517691 KCPQ6ZWJ8 1503 aa3.46□□□□□ -1.85
SKP1-204ENST00000517691 TTLL8A6PVC2 850 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 CDK2AP1O14519 115 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 PPFIA4O75335 1185 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 ANXA1P04083 346 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 P4HBP07237 508 aaKnown RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 MMP10P09238 476 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 GYS1P13807 737 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 EIF5P55010 431 aaKnown RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 EXOSC9Q06265 439 aaKnown RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 BMS1Q14692 1282 aaKnown RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 TWISTNBQ3B726 338 aaPredicted RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 CCDC30Q5VVM6 783 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 NBPF10Q6P3W6 841 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms