RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 CLASRPQ8N2M8 674 aaKnown RBP12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 IL1RAPL2Q9NP60 686 aa12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 TTC28Q96AY4 2481 aa12.89□□□□□ -0.35
PDGFRB-203ENST00000517660 SLURP2P0DP57 97 aa12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 CYP7A1P22680 504 aa12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 FLT3LGP49771 235 aa12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 TMED8Q6PL24 325 aaPredicted RBP12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 FASTKD5Q7L8L6 764 aaKnown RBP12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 PI4KBQ9UBF8 816 aa12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 AFG3L2Q9Y4W6 797 aa12.88□□□□□ -0.35
PDGFRB-203ENST00000517660 APBB1O00213 710 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 IDH1O75874 414 aaKnown RBP12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 FCGRTP55899 365 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 MAP3K12Q12852 859 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 C20orf194Q5TEA3 1177 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 GPAT2Q6NUI2 795 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 ADGRA1Q86SQ6 560 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 PXYLP1Q8TE99 480 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 TGFBRAP1Q8WUH2 860 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 CDX2Q99626 313 aaPredicted RBP12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 HERC5Q9UII4 1024 aaKnown RBP12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 MYH13Q9UKX3 1938 aa12.87□□□□□ -0.35
PDGFRB-203ENST00000517660 A0A0G2JLL6 359 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 CYP2C8P10632 490 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 PRRT2Q7Z6L0 340 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 CERS3Q8IU89 383 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 FOXP4Q8IVH2 680 aaPredicted RBP12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 MAPKAPK5Q8IW41 473 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 MGAMO43451 1857 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 DNAH12Q6ZR08 3092 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 PFASO15067 1338 aa12.86□□□□□ -0.35
PDGFRB-203ENST00000517660 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 CAPN2P17655 700 aa12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 CAP2P40123 477 aa12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 IRF5Q13568 498 aa12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 TTF1Q15361 905 aaPredicted RBP12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 MAGEB6Q8N7X4 407 aa12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 PARK7Q99497 189 aaKnown RBP12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.85□□□□□ -0.35
PDGFRB-203ENST00000517660 TRIM75PA6NK02 468 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 METTL16Q86W50 562 aaKnown RBP12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 ANKLE1Q8NAG6 615 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 MIGA1Q8NAN2 632 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 TBC1D2Q9BYX2 928 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 PALD1Q9ULE6 856 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 FLT1P17948 1338 aa12.84□□□□□ -0.35
PDGFRB-203ENST00000517660 USP17L5A8MUK1 530 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 TNFRSF10AO00220 468 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 HLA-DOAP06340 250 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 USP5P45974 858 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 MDM2Q00987 491 aaPredicted RBP12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 TRIM32Q13049 653 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 SPP2Q13103 211 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 RRP1BQ14684 758 aaKnown RBP12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 ZNF280CQ8ND82 737 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 NBPF3Q9H094 633 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.83□□□□□ -0.36
PDGFRB-203ENST00000517660 SLC9C2Q5TAH2 1124 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 MYLIPQ8WY64 445 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 FAM122AQ96E09 287 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 TTYH1Q9H313 450 aaPredicted RBP12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 SEMA6BQ9H3T3 888 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 AS3MTQ9HBK9 375 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 GINM1Q9NU53 330 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 SAP30BPQ9UHR5 308 aaKnown RBP12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 AK9Q5TCS8 1911 aa12.82□□□□□ -0.36
PDGFRB-203ENST00000517660 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 GOLIM4O00461 696 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 ASNSP08243 561 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 PDE6AP16499 860 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 ATP5JP18859 108 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 SYMPKQ92797 1274 aaKnown RBP12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 DNAJC2Q99543 621 aaKnown RBP12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 WDR18Q9BV38 432 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 LRRCC1Q9C099 1032 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 BOLA2Q9H3K6 86 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 OGDHLQ9ULD0 1010 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms