RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 CCDC163A0A0D9SF12 145 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GOLGA6CA6NDK9 693 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GOLGA6BA6NDN3 693 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 J3QL48 77 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PDE2AO00408 941 aaPredicted RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 NEMP1O14524 444 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 APAF1O14727 1248 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TBX3O15119 743 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PRODHO43272 600 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 NBPF7P0C2Y1 421 aaPredicted RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GOLGA6DP0CG33 693 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 NME1P15531 152 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ARNTP27540 789 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 POLR2BP30876 1174 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GRIA2P42262 883 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TRAPPC10P48553 1259 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PPP2R2AP63151 447 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SLC7A5Q01650 507 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PPP2R3AQ06190 1150 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 POU5F1BQ06416 359 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PCDH1Q08174 1060 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 HLTFQ14527 1009 aaKnown RBP eCLIP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LRRC14Q15048 493 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PTPN21Q16825 1174 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ZNF423Q2M1K9 1284 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GNPTABQ3T906 1256 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ZC3H12BQ5HYM0 836 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 RPS26P11Q5JNZ5 115 aaPredicted RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 RNF219Q5W0B1 726 aaPredicted RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MAP1SQ66K74 1059 aaPredicted RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 KRBA2Q6ZNG9 492 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 BRAPQ7Z569 592 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SPATS2Q86XZ4 545 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 IFNL3Q8IZI9 196 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PPM1KQ8N3J5 372 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PAF1Q8N7H5 531 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TMEM102Q8N9M5 508 aaPredicted RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 USP33Q8TEY7 942 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PPP1R14AQ96A00 147 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SENP7Q9BQF6 1050 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PLCD4Q9BRC7 762 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MRPL4Q9BYD3 311 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 FBRSQ9HAH7 460 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TRIM39Q9HCM9 518 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LUC7LQ9NQ29 371 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CASS4Q9NQ75 786 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 STRN4Q9NRL3 753 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GOLGA6AQ9NYA3 693 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TLR7Q9NYK1 1049 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 REV1Q9UBZ9 1251 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 NDOR1Q9UHB4 597 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 DDX20Q9UHI6 824 aaKnown RBP3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 USP25Q9UHP3 1055 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ZBTB21Q9ULJ3 1066 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SAMM50Q9Y512 469 aa3.43□□□□□ -1.86
SCARNA11.3-201ENST00000517276 A0A1B0GTH6 734 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 E2F8A0AVK6 867 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 DCDC2BA2VCK2 349 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 BLACEA4D250 179 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SLC22A31A6NKX4 558 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 M0R2C6 588 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SPINT1O43278 529 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TBX1O43435 398 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 OPA1O60313 960 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 RFPL1O75677 317 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MT-CO1P00395 513 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CT47B1P0C2W7 299 aaPredicted RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 JMJD7P0C870 316 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TRIM27P14373 513 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GGCXP38435 758 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SETQ01105 290 aaPredicted RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ZNF252P-AS1Q0IIN9 211 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 FOXC1Q12948 553 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 RAPGEF1Q13905 1077 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MORC3Q14149 939 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 INPP5AQ14642 412 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 GRM3Q14832 879 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LRRFIP1Q32MZ4 808 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TMEM95Q3KNT9 176 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 COBLL1Q53SF7 1204 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 WIPI1Q5MNZ9 446 aaPredicted RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 FAM83BQ5T0W9 1011 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 SYDE2Q5VT97 1194 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TDRD10Q5VZ19 366 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 ANO1Q5XXA6 986 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 NLRC3Q7RTR2 1065 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 MORC1Q86VD1 984 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PPFIBP1Q86W92 1011 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 TAB3Q8N5C8 712 aaPredicted RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PJA1Q8NG27 643 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 RNF217Q8TC41 542 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PARD3BQ8TEW8 1205 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 LRGUKQ96M69 825 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 IPO9Q96P70 1041 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 POP1Q99575 1024 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 AARSD1Q9BTE6 412 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PUS7LQ9H0K6 701 aaKnown RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 EPN3Q9H201 632 aa3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 CLEC4MQ9H2X3 399 aaPredicted RBP3.42□□□□□ -1.86
SCARNA11.3-201ENST00000517276 PHAXQ9H814 394 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms